Information for 16-GCACAGGGACAGAGAA (Motif 31)

A C T G A G T C C G T A A G T C C G T A A T C G C T A G A T C G G T C A A G T C C G T A A C T G C G T A A C T G G T C A G T C A
Reverse Opposite:
A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C G T A T G C A G T C A T G C A C G T A C T G A C G T A C T G A G T C
p-value:1e-7
log p-value:-1.630e+01
Information Content per bp:1.884
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets67.8 +/- 27.3bp
Average Position of motif in Background43.2 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCACAGGGACAGAGAA
--CCAGGAACAG----
 A C T G A G T C C G T A A G T C C G T A A T C G C T A G A T C G G T C A A G T C C G T A A C T G C G T A A C T G G T C A G T C A
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GCACAGGGACAGAGAA
NNTTTGCACACGGCCC-----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A T C G C T A G A T C G G T C A A G T C C G T A A C T G C G T A A C T G G T C A G T C A
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCACAGGGACAGAGAA--
--AAACAGACAAAGGAAT
 A C T G A G T C C G T A A G T C C G T A A T C G C T A G A T C G G T C A A G T C C G T A A C T G C G T A A C T G G T C A G T C A A C G T A C G T
A C G T A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GCACAGGGACAGAGAA
-CACAGN---------
 A C T G A G T C C G T A A G T C C G T A A T C G C T A G A T C G G T C A A G T C C G T A A C T G C G T A A C T G G T C A G T C A
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GCACAGGGACAGAGAA
-----GGAACAAAGR-
 A C T G A G T C C G T A A G T C C G T A A T C G C T A G A T C G G T C A A G T C C G T A A C T G C G T A A C T G G T C A G T C A
A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCACAGGGACAGAGAA
GCGCATGCGCAG----
 A C T G A G T C C G T A A G T C C G T A A T C G C T A G A T C G G T C A A G T C C G T A A C T G C G T A A C T G G T C A G T C A
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GCACAGGGACAGAGAA----
-----GNNACCGAGAATNNN
 A C T G A G T C C G T A A G T C C G T A A T C G C T A G A T C G G T C A A G T C C G T A A C T G C G T A A C T G G T C A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GCACAGGGACAGAGAA
TTGGCANNNTGCCAAG---
 A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A T C G C T A G A T C G G T C A A G T C C G T A A C T G C G T A A C T G G T C A G T C A
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----GCACAGGGACAGAGAA
AGCGGCACACACGCAA----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A T C G C T A G A T C G G T C A A G T C C G T A A C T G C G T A A C T G G T C A G T C A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GCACAGGGACAGAGAA
AAGCACATGG--------
 A C G T A C G T A C T G A G T C C G T A A G T C C G T A A T C G C T A G A T C G G T C A A G T C C G T A A C T G C G T A A C T G G T C A G T C A
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T