Information for 2-GCAHHTCCCAGCC (Motif 3)

A C T G A G T C C G T A G A C T G C A T A G C T A G T C A G T C A G T C C G T A A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G A G T C A C G T A C T G A C T G A C T G C T G A C G A T C T A G A C G T A C T G G T A C
p-value:1e-14
log p-value:-3.449e+01
Information Content per bp:1.846
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.9 +/- 29.5bp
Average Position of motif in Background26.1 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GCAHHTCCCAGCC-
----TGCCCAGNHW
 A C T G A G T C C G T A G A C T G C A T A G C T A G T C A G T C A G T C C G T A A C T G A G T C A T G C A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GCAHHTCCCAGCC-------
-----TCCCAGMCRAGCCCC
 A C T G A G T C C G T A G A C T G C A T A G C T A G T C A G T C A G T C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCAHHTCCCAGCC----
--ATTTCCCAGVAKSCY
 A C T G A G T C C G T A G A C T G C A T A G C T A G T C A G T C A G T C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.59
Offset:8
Orientation:forward strand
Alignment:GCAHHTCCCAGCC
--------CAGCC
 A C T G A G T C C G T A G A C T G C A T A G C T A G T C A G T C A G T C C G T A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCAHHTCCCAGCC
--HTTTCCCASG-
 A C T G A G T C C G T A G A C T G C A T A G C T A G T C A G T C A G T C C G T A A C T G A G T C A T G C
A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCAHHTCCCAGCC-----
-ANNTNCCCACCCANNAC
 A C T G A G T C C G T A G A C T G C A T A G C T A G T C A G T C A G T C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCAHHTCCCAGCC
--AAATCACAGCA
 A C T G A G T C C G T A G A C T G C A T A G C T A G T C A G T C A G T C C G T A A C T G A G T C A T G C
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GCAHHTCCCAGCC
------CACAGN-
 A C T G A G T C C G T A G A C T G C A T A G C T A G T C A G T C A G T C C G T A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

GFY(?)/Promoter/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCAHHTCCCAGCC
ACTACAATTCCC----
 A C G T A C G T A C G T A C T G A G T C C G T A G A C T G C A T A G C T A G T C A G T C A G T C C G T A A C T G A G T C A T G C
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCAHHTCCCAGCC---
RACTACAACTCCCAGVAKGC
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A G A C T G C A T A G C T A G T C A G T C A G T C C G T A A C T G A G T C A T G C A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C