Information for 13-CAGCCTTCTCAGG (Motif 29)

A G T C C G T A A T C G A G T C A G T C G A C T A G C T A G T C A G C T A G T C G C T A A C T G A T C G
Reverse Opposite:
A T G C A G T C C A G T C T A G C T G A T C A G T C G A C G T A C T A G A C T G A T G C A C G T A C T G
p-value:1e-7
log p-value:-1.631e+01
Information Content per bp:1.812
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.3 +/- 21.8bp
Average Position of motif in Background35.1 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGCCTTCTCAGG
CAGCC--------
 A G T C C G T A A T C G A G T C A G T C G A C T A G C T A G T C A G C T A G T C G C T A A C T G A T C G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCTTCTCAGG
CACAGN---------
 A C G T A C G T A G T C C G T A A T C G A G T C A G T C G A C T A G C T A G T C A G C T A G T C G C T A A C T G A T C G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCTTCTCAGG
BCAGACWA------
 A C G T A G T C C G T A A T C G A G T C A G T C G A C T A G C T A G T C A G C T A G T C G C T A A C T G A T C G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAGCCTTCTCAGG
TCAGTCTT------
 A C G T A G T C C G T A A T C G A G T C A G T C G A C T A G C T A G T C A G C T A G T C G C T A A C T G A T C G
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAGCCTTCTCAGG--
---CCATATATGGNA
 A G T C C G T A A T C G A G T C A G T C G A C T A G C T A G T C A G C T A G T C G C T A A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGCCTTCTCAGG
TGCAGCTGTCCCT--
 A C G T A C G T A G T C C G T A A T C G A G T C A G T C G A C T A G C T A G T C A G C T A G T C G C T A A C T G A T C G
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CAGCCTTCTCAGG
NNGCAGCTGTC-----
 A C G T A C G T A C G T A G T C C G T A A T C G A G T C A G T C G A C T A G C T A G T C A G C T A G T C G C T A A C T G A T C G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CAGCCTTCTCAGG
NNGCAGCTGTT-----
 A C G T A C G T A C G T A G T C C G T A A T C G A G T C A G T C G A C T A G C T A G T C A G C T A G T C G C T A A C T G A T C G
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CAGCCTTCTCAGG
NGTCAGCANTTT----
 A C G T A C G T A C G T A G T C C G T A A T C G A G T C A G T C G A C T A G C T A G T C A G C T A G T C G C T A A C T G A T C G
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CAGCCTTCTCAGG
CAGCTGTT-----
 A G T C C G T A A T C G A G T C A G T C G A C T A G C T A G T C A G C T A G T C G C T A A C T G A T C G
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T