Information for 15-TGGGTGTCAA (Motif 28)

A C G T A C T G A C T G C T A G C G A T A C T G A C G T A G T C C T G A C T G A
Reverse Opposite:
G A C T A G C T T C A G T G C A A G T C C G T A A G T C G T A C A G T C C G T A
p-value:1e-7
log p-value:-1.631e+01
Information Content per bp:1.844
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif43.4
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets59.3 +/- 23.4bp
Average Position of motif in Background53.5 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---TGGGTGTCAA----
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T A C T G A C T G C T A G C G A T A C T G A C G T A G T C C T G A C T G A A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TGGGTGTCAA
-AGGTGTCA-
 A C G T A C T G A C T G C T A G C G A T A C T G A C G T A G T C C T G A C T G A
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

TBX2/MA0688.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TGGGTGTCAA-
AAGGTGTGAAA
 A C G T A C T G A C T G C T A G C G A T A C T G A C G T A G T C C T G A C T G A A C G T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TGGGTGTCAA
---NTGTCAN
 A C G T A C T G A C T G C T A G C G A T A C T G A C G T A G T C C T G A C T G A
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGGGTGTCAA
--CCTGTCAA
 A C G T A C T G A C T G C T A G C G A T A C T G A C G T A G T C C T G A C T G A
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TGGGTGTCAA
-AGGTGTGA-
 A C G T A C T G A C T G C T A G C G A T A C T G A C G T A G T C C T G A C T G A
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TGGGTGTCAA----
AATAGGGTATCATATAT
 A C G T A C G T A C G T A C G T A C T G A C T G C T A G C G A T A C T G A C G T A G T C C T G A C T G A A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGGGTGTCAA-
TAGGTGTGAAG
 A C G T A C T G A C T G C T A G C G A T A C T G A C G T A G T C C T G A C T G A A C G T
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGGGTGTCAA
--GCTGTCAA
 A C G T A C T G A C T G C T A G C G A T A C T G A C G T A G T C C T G A C T G A
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGGGTGTCAA-
-VGCTGWCAVB
 A C G T A C T G A C T G C T A G C G A T A C T G A C G T A G T C C T G A C T G A A C G T
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C