Information for 13-AWTTAAGCAG (Motif 26)

G T C A C G A T A C G T A C G T C G T A C G T A A C T G G A T C C G T A A C T G
Reverse Opposite:
G T A C C G A T C A T G G T A C A C G T A C G T T G C A G T C A C G T A A C G T
p-value:1e-8
log p-value:-1.875e+01
Information Content per bp:1.790
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif24.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets43.9 +/- 29.1bp
Average Position of motif in Background47.7 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DUXA/MA0884.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AWTTAAGCAG
CTAATTTAATCAA
 A C G T A C G T A C G T G T C A C G A T A C G T A C G T C G T A C G T A A C T G G A T C C G T A A C T G
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

LMX1B/MA0703.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AWTTAAGCAG
TTAATTAA----
 A C G T A C G T G T C A C G A T A C G T A C G T C G T A C G T A A C T G G A T C C G T A A C T G
A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A A C G T A C G T A C G T A C G T

PH0143.1_Pou2f1/Jaspar

Match Rank:3
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------AWTTAAGCAG
ATATATTAATTAAGTA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T A C G T A C G T C G T A C G T A A C T G G A T C C G T A A C T G
C T G A G A C T C T A G G C A T C T G A G C A T G C A T G T C A C G T A C G A T A C G T G C T A C T G A A C T G G C A T C G T A A C G T

PH0132.1_Pax6/Jaspar

Match Rank:4
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------AWTTAAGCAG
GNNAATTAATTAATCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T A C G T A C G T C G T A C G T A A C T G G A T C C G T A A C T G
C A T G G C A T A T G C T G C A T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T G A T C T C G A A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AWTTAAGCAG
TCATCAATCA-
 A C G T G T C A C G A T A C G T A C G T C G T A C G T A A C T G G A T C C G T A A C T G
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T

DUX4/MA0468.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AWTTAAGCAG
TAATTTAATCA-
 A C G T A C G T G T C A C G A T A C G T A C G T C G T A C G T A A C T G G A T C C G T A A C T G
G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A A C G T

PRRX1/MA0716.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AWTTAAGCAG
CTAATTAA----
 A C G T A C G T G T C A C G A T A C G T A C G T C G T A C G T A A C T G G A T C C G T A A C T G
A G T C G A C T T C G A G T C A A G C T G A C T G C T A T C G A A C G T A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AWTTAAGCAG
GTAATTAA----
 A C G T A C G T G T C A C G A T A C G T A C G T C G T A C G T A A C T G G A T C C G T A A C T G
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T

LMX1A/MA0702.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AWTTAAGCAG
TTAATTAA----
 A C G T A C G T G T C A C G A T A C G T A C G T C G T A C G T A A C T G G A T C C G T A A C T G
A G C T G A C T C T G A G C T A G C A T C G A T C T G A T C G A A C G T A C G T A C G T A C G T

PH0147.1_Pou3f2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AWTTAAGCAG----
GATAATTAATTAGTTTG
 A C G T A C G T A C G T G T C A C G A T A C G T A C G T C G T A C G T A A C T G G A T C C G T A A C T G A C G T A C G T A C G T A C G T
T A C G C G A T C G A T C G T A G C T A G A C T A G C T G C T A C G T A C G A T A C G T G C T A C T A G A C G T C A G T G A C T C T A G