Information for 10-TCAAGGCTCA (Motif 21)

A C G T A G T C G T C A G T C A A C T G A C T G A G T C A G C T A G T C C G T A
Reverse Opposite:
A C G T A C T G C T G A A C T G A G T C G T A C A C G T A C G T A C T G C G T A
p-value:1e-8
log p-value:-2.038e+01
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.0 +/- 17.5bp
Average Position of motif in Background41.5 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXRG/MA0856.1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TCAAGGCTCA
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T C A A C T G A C T G A G T C A G C T A G T C C G T A
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

Rxra/MA0512.2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TCAAGGCTCA
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T C A A C T G A C T G A G T C A G C T A G T C C G T A
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TCAAGGCTCA
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T C A A C T G A C T G A G T C A G C T A G T C C G T A
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCAAGGCTCA----
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A G T C G T C A G T C A A C T G A C T G A G T C A G C T A G T C C G T A A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TCAAGGCTCA
GAGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T C A A C T G A C T G A G T C A G C T A G T C C G T A
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCAAGGCTCA-
-CAAAGGTCAG
 A C G T A G T C G T C A G T C A A C T G A C T G A G T C A G C T A G T C C G T A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCAAGGCTCA--
AAAGGTCAAAGGTCAAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T C A A C T G A C T G A G T C A G C T A G T C C G T A A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TCAAGGCTCA
GAGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T C A A C T G A C T G A G T C A G C T A G T C C G T A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCAAGGCTCA----
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A G T C G T C A G T C A A C T G A C T G A G T C A G C T A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCAAGGCTCA----
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A G T C G T C A G T C A A C T G A C T G A G T C A G C T A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G