Information for 8-TGAAATGCAA (Motif 20)

C G A T T A C G C G T A G T C A G T C A A C G T T C A G A G T C C G T A C T G A
Reverse Opposite:
A G C T C G A T A C T G A G T C G T C A A C G T A C G T G C A T A G T C C G T A
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.808
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif45.5
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets47.5 +/- 25.6bp
Average Position of motif in Background51.3 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGAAATGCAA-----
--ATATGCAAATNNN
 C G A T T A C G C G T A G T C A G T C A A C G T T C A G A G T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGAAATGCAA--
--ATATGCAAAT
 C G A T T A C G C G T A G T C A G T C A A C G T T C A G A G T C C G T A C T G A A C G T A C G T
A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGAAATGCAA--
CATTGTTATGCAAAT
 A C G T A C G T A C G T C G A T T A C G C G T A G T C A G T C A A C G T T C A G A G T C C G T A C T G A A C G T A C G T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGAAATGCAA--
CTTTGTTATGCAAAT
 A C G T A C G T A C G T C G A T T A C G C G T A G T C A G T C A A C G T T C A G A G T C C G T A C T G A A C G T A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGAAATGCAA--
--TTATGCAAAT
 C G A T T A C G C G T A G T C A G T C A A C G T T C A G A G T C C G T A C T G A A C G T A C G T
A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGAAATGCAA----
--AGATGCAATCCC
 C G A T T A C G C G T A G T C A G T C A A C G T T C A G A G T C C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

PB0169.1_Sox15_2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TGAAATGCAA
TTGAATGAAATTCGA
 A C G T A C G T A C G T A C G T A C G T C G A T T A C G C G T A G T C A G T C A A C G T T C A G A G T C C G T A C T G A
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGAAATGCAA-----
---TATGCWAATBAV
 C G A T T A C G C G T A G T C A G T C A A C G T T C A G A G T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGAAATGCAA-
CGGAAGTGAAAC
 A C G T C G A T T A C G C G T A G T C A G T C A A C G T T C A G A G T C C G T A C T G A A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGAAATGCAA--
GAAAAAATTGCAAGG
 A C G T A C G T A C G T C G A T T A C G C G T A G T C A G T C A A C G T T C A G A G T C C G T A C T G A A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G