Information for 11-GRGGAGCCCAGGRGAG (Motif 19)

A C T G T C A G C T A G T C A G T C G A A T C G A G T C A T G C G T A C C G T A A C T G A T C G T C A G A C T G C T G A A C T G
Reverse Opposite:
A G T C A G C T A G T C A G T C A T G C T A G C C G A T A C T G T A C G C T A G T A G C A G C T A G T C A G T C A G T C A G T C
p-value:1e-10
log p-value:-2.398e+01
Information Content per bp:1.711
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif15.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets50.7 +/- 24.6bp
Average Position of motif in Background48.9 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GRGGAGCCCAGGRGAG
--GGGGCCCAAGGGGG
 A C T G T C A G C T A G T C A G T C G A A T C G A G T C A T G C G T A C C G T A A C T G A T C G T C A G A C T G C T G A A C T G
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GRGGAGCCCAGGRGAG
---GTCCCCAGGGGA-
 A C T G T C A G C T A G T C A G T C G A A T C G A G T C A T G C G T A C C G T A A C T G A T C G T C A G A C T G C T G A A C T G
A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:GRGGAGCCCAGGRGAG-
--------CAGGTGAGG
 A C T G T C A G C T A G T C A G T C G A A T C G A G T C A T G C G T A C C G T A A C T G A T C G T C A G A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GRGGAGCCCAGGRGAG-
-----TCCCNNGGGACN
 A C T G T C A G C T A G T C A G T C G A A T C G A G T C A T G C G T A C C G T A A C T G A T C G T C A G A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GRGGAGCCCAGGRGAG-
---CACCCCCGGGGGGG
 A C T G T C A G C T A G T C A G T C G A A T C G A G T C A T G C G T A C C G T A A C T G A T C G T C A G A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GRGGAGCCCAGGRGAG-
--GGCACCCAGGGGTGC
 A C T G T C A G C T A G T C A G T C G A A T C G A G T C A T G C G T A C C G T A A C T G A T C G T C A G A C T G C T G A A C T G A C G T
A C G T A C G T T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GRGGAGCCCAGGRGAG
----AGCCAATCGG--
 A C T G T C A G C T A G T C A G T C G A A T C G A G T C A T G C G T A C C G T A A C T G A T C G T C A G A C T G C T G A A C T G
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GRGGAGCCCAGGRGAG----
-----DCHCAGCAGGRGGCC
 A C T G T C A G C T A G T C A G T C G A A T C G A G T C A T G C G T A C C G T A A C T G A T C G T C A G A C T G C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GRGGAGCCCAGGRGAG
GTGGGCCCCA------
 A C T G T C A G C T A G T C A G T C G A A T C G A G T C A T G C G T A C C G T A A C T G A T C G T C A G A C T G C T G A A C T G
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GRGGAGCCCAGGRGAG--
------CACAGCAGGGGG
 A C T G T C A G C T A G T C A G T C G A A T C G A G T C A T G C G T A C C G T A A C T G A T C G T C A G A C T G C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G