Information for 9-CTGCAGCTACACA (Motif 18)

A G T C C A G T A C T G G T A C C G T A A C T G G T A C A G C T C G T A G A T C C G T A A G T C G T C A
Reverse Opposite:
A C G T C T A G A C G T C A T G G A C T C T G A A C T G A G T C A C G T A C T G A G T C G C T A A C T G
p-value:1e-10
log p-value:-2.449e+01
Information Content per bp:1.820
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets57.3 +/- 26.8bp
Average Position of motif in Background49.6 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGCAGCTACACA
CAGCAGCTGN---
 A G T C C A G T A C T G G T A C C G T A A C T G G T A C A G C T C G T A G A T C C G T A A G T C G T C A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTGCAGCTACACA
NNAGCAGCTGCT--
 A C G T A G T C C A G T A C T G G T A C C G T A A C T G G T A C A G C T C G T A G A T C C G T A A G T C G T C A
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTGCAGCTACACA
--GCAGCTGTNN-
 A G T C C A G T A C T G G T A C C G T A A C T G G T A C A G C T C G T A G A T C C G T A A G T C G T C A
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGCAGCTACACA
NNGCAGCTGTC--
 A G T C C A G T A C T G G T A C C G T A A C T G G T A C A G C T C G T A G A T C C G T A A G T C G T C A
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTGCAGCTACACA--
CTCAGCAGCTGCTACTG
 A C G T A C G T A G T C C A G T A C T G G T A C C G T A A C T G G T A C A G C T C G T A G A T C C G T A A G T C G T C A A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGCAGCTACACA
NNGCAGCTGTT--
 A G T C C A G T A C T G G T A C C G T A A C T G G T A C A G C T C G T A G A T C C G T A A G T C G T C A
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGCAGCTACACA
-CGCAGCTGCG--
 A G T C C A G T A C T G G T A C C G T A A C T G G T A C A G C T C G T A G A T C C G T A A G T C G T C A
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGCAGCTACACA
-AGCAGCTGCT--
 A G T C C A G T A C T G G T A C C G T A A C T G G T A C A G C T C G T A G A T C C G T A A G T C G T C A
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGCAGCTACACA
-ANCAGCTG----
 A G T C C A G T A C T G G T A C C G T A A C T G G T A C A G C T C G T A G A T C C G T A A G T C G T C A
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGCAGCTACACA
-NGAAGC------
 A G T C C A G T A C T G G T A C C G T A A C T G G T A C A G C T C G T A G A T C C G T A A G T C G T C A
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T