Information for 7-VTGGAGAGARGGCAGR (Motif 10)

T C G A A C G T C A T G T A C G C T G A T A C G C G T A T C A G C T G A C T G A C A T G T C A G T A G C G C T A T C A G C T G A
Reverse Opposite:
G A C T A G T C C G A T A T C G A G T C G T A C G A C T G A C T A G T C G C A T A T G C G A C T A T G C G T A C T G C A A G C T
p-value:1e-11
log p-value:-2.579e+01
Information Content per bp:1.458
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.0 +/- 23.6bp
Average Position of motif in Background55.6 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:VTGGAGAGARGGCAGR-
--TGACANARRCCAGRC
 T C G A A C G T C A T G T A C G C T G A T A C G C G T A T C A G C T G A C T G A C A T G T C A G T A G C G C T A T C A G C T G A A C G T
A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:VTGGAGAGARGGCAGR--
-GGGRAARRGRMCAGMTG
 T C G A A C G T C A T G T A C G C T G A T A C G C G T A T C A G C T G A C T G A C A T G T C A G T A G C G C T A T C A G C T G A A C G T A C G T
A C G T C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-VTGGAGAGARGGCAGR
GTAGGGCAAAGGTCA--
 A C G T T C G A A C G T C A T G T A C G C T G A T A C G C G T A T C A G C T G A C T G A C A T G T C A G T A G C G C T A T C A G C T G A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:VTGGAGAGARGGCAGR
TGGGGCAAAGGTCA--
 T C G A A C G T C A T G T A C G C T G A T A C G C G T A T C A G C T G A C T G A C A T G T C A G T A G C G C T A T C A G C T G A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:VTGGAGAGARGGCAGR
TAGGGCAAAGGTCA--
 T C G A A C G T C A T G T A C G C T G A T A C G C G T A T C A G C T G A C T G A C A T G T C A G T A G C G C T A T C A G C T G A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-VTGGAGAGARGGCAGR
AGGGGTCAGAGGTCA--
 A C G T T C G A A C G T C A T G T A C G C T G A T A C G C G T A T C A G C T G A C T G A C A T G T C A G T A G C G C T A T C A G C T G A
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:VTGGAGAGARGGCAGR
GAGGTCAAAGGTCA--
 T C G A A C G T C A T G T A C G C T G A T A C G C G T A T C A G C T G A C T G A C A T G T C A G T A G C G C T A T C A G C T G A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-VTGGAGAGARGGCAGR
AATGGAAAAT-------
 A C G T T C G A A C G T C A T G T A C G C T G A T A C G C G T A T C A G C T G A C T G A C A T G T C A G T A G C G C T A T C A G C T G A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--VTGGAGAGARGGCAGR
CANAGNNCAAAGTCCA--
 A C G T A C G T T C G A A C G T C A T G T A C G C T G A T A C G C G T A T C A G C T G A C T G A C A T G T C A G T A G C G C T A T C A G C T G A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-VTGGAGAGARGGCAGR
AGAGTCCAAAGTCCA--
 A C G T T C G A A C G T C A T G T A C G C T G A T A C G C G T A T C A G C T G A C T G A C A T G T C A G T A G C G C T A T C A G C T G A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T