Information for 1-VCATSTGGYN (Motif 1)

T A G C G T A C C G T A A C G T T A C G G C A T A C T G A T C G G A T C T G C A
Reverse Opposite:
A C G T C T A G T A G C A G T C C G T A A T G C T G C A G C A T A C T G A T C G
p-value:1e-83
log p-value:-1.927e+02
Information Content per bp:1.594
Number of Target Sequences with motif345.0
Percentage of Target Sequences with motif40.02%
Number of Background Sequences with motif2250.7
Percentage of Background Sequences with motif13.31%
Average Position of motif in Targets51.4 +/- 22.9bp
Average Position of motif in Background49.3 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:VCATSTGGYN
VCAGCTGBNN
 T A G C G T A C C G T A A C G T T A C G G C A T A C T G A T C G G A T C T G C A
T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:2
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---VCATSTGGYN
NNVVCAGCTGBN-
 A C G T A C G T A C G T T A G C G T A C C G T A A C G T T A C G G C A T A C T G A T C G G A T C T G C A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:3
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:VCATSTGGYN
-CACGTGNT-
 T A G C G T A C C G T A A C G T T A C G G C A T A C T G A T C G G A T C T G C A
A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-VCATSTGGYN-
GCCAGCTGBTNB
 A C G T T A G C G T A C C G T A A C G T T A C G G C A T A C T G A T C G G A T C T G C A A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:VCATSTGGYN
ACATATGG--
 T A G C G T A C C G T A A C G T T A C G G C A T A C T G A T C G G A T C T G C A
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.88
Offset:0
Orientation:forward strand
Alignment:VCATSTGGYN
CCATGTGCTT
 T A G C G T A C C G T A A C G T T A C G G C A T A C T G A T C G G A T C T G C A
T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-VCATSTGGYN
NACATATGGN-
 A C G T T A G C G T A C C G T A A C G T T A C G G C A T A C T G A T C G G A T C T G C A
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:8
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-VCATSTGGYN
AACAKATGGY-
 A C G T T A G C G T A C C G T A A C G T T A C G G C A T A C T G A T C G G A T C T G C A
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.87
Offset:0
Orientation:forward strand
Alignment:VCATSTGGYN
ACAGCTGTTN
 T A G C G T A C C G T A A C G T T A C G G C A T A C T G A T C G G A T C T G C A
T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---VCATSTGGYN
NNACCACGTGGT-
 A C G T A C G T A C G T T A G C G T A C C G T A A C G T T A C G G C A T A C T G A T C G G A T C T G C A
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A C G T