p-value: | 1e-11 |
log p-value: | -2.642e+01 |
Information Content per bp: | 1.679 |
Number of Target Sequences with motif | 27.0 |
Percentage of Target Sequences with motif | 2.89% |
Number of Background Sequences with motif | 244.4 |
Percentage of Background Sequences with motif | 0.53% |
Average Position of motif in Targets | 47.9 +/- 25.1bp |
Average Position of motif in Background | 49.9 +/- 27.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGCCCAAAAGCCA-- TTGGCANNNTGCCAAG |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGCCCAAAAGCCA- TGGCACCATGCCAA |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TGCCCAAAAGCCA- ----CAAAGGTCAG |
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HNF4G/MA0484.1/Jaspar
Match Rank: | 4 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGCCCAAAAGCCA AGAGTCCAAAGTCCA |
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Nr2e1/MA0676.1/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TGCCCAAAAGCCA- -----AAAAGTCAA |
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HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TGCCCAAAAGCCA CANAGNNCAAAGTCCA |
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PB0133.1_Hic1_2/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TGCCCAAAAGCCA GGGTGTGCCCAAAAGG-- |
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TFAP2B(var.3)/MA0813.1/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGCCCAAAAGCCA TGCCCTGAGGGCA |
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RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCCCAAAAGCCA TAGGGCAAAGGTCA |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGCCCAAAAGCCA- TGGCAGNCTGCCAG |
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