Information for 13-CTAGATGGCAGCA (Motif 22)

A G T C A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C T G
p-value:1e-8
log p-value:-1.880e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 27.5bp
Average Position of motif in Background50.3 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTAGATGGCAGCA
CAAGATGGCGGC-
 A G T C A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTAGATGGCAGCA
CAAGATGGCGGC-
 A G T C A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CTAGATGGCAGCA-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTAGATGGCAGCA
AACAGATGGC----
 A C G T A G T C A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTAGATGGCAGCA
--ARNTGACA---
 A G T C A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CTAGATGGCAGCA
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTAGATGGCAGCA
--GGTTGGCAT--
 A G T C A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTAGATGGCAGCA
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

PB0125.1_Gata3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTAGATGGCAGCA-----
TTTTGTAGATTTTATCGACTTA
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G A C T A C G T G C A T C A G T T C A G A G C T G C T A C T A G G C T A G A C T C G A T A C G T G A C T C T G A A C G T G A T C C T A G T C G A A T G C C G A T G C A T G T C A

PH0014.1_Cphx/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTAGATGGCAGCA-
NTTGATTNNATCAN
 A G T C A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A A C G T
C G A T A G C T C G A T C T A G C G T A A C G T A C G T A T G C T A C G G T C A A C G T A G T C C G T A G A C T