Information for 2-GGGAATTGTAGTC (Motif 4)

A C T G T A C G C T A G G T C A C T G A G A C T A C G T A C T G A C G T T G C A C T A G G A C T A G T C
Reverse Opposite:
T C A G C T G A A G T C A C G T T G C A G T A C T G C A C T G A A G C T C A G T A G T C A G T C T A G C
p-value:1e-15
log p-value:-3.643e+01
Information Content per bp:1.667
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.18%
Number of Background Sequences with motif207.7
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets55.8 +/- 26.1bp
Average Position of motif in Background46.5 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:GGGAATTGTAGTC
GGGAATTGTAGT-
 A C T G T A C G C T A G G T C A C T G A G A C T A C G T A C T G A C G T T G C A C T A G G A C T A G T C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.83
Offset:-7
Orientation:reverse strand
Alignment:-------GGGAATTGTAGTC
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G C T A G G T C A C T G A G A C T A C G T A C T G A C G T T G C A C T A G G A C T A G T C
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.81
Offset:-7
Orientation:reverse strand
Alignment:-------GGGAATTGTAGTC
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G C T A G G T C A C T G A G A C T A C G T A C T G A C G T T G C A C T A G G A C T A G T C
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGGAATTGTAGTC
TGGGGA---------
 A C G T A C G T A C T G T A C G C T A G G T C A C T G A G A C T A C G T A C T G A C G T T G C A C T A G G A C T A G T C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGGAATTGTAGTC
TGGAACAGMA---
 A C T G T A C G C T A G G T C A C T G A G A C T A C G T A C T G A C G T T G C A C T A G G A C T A G T C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGGAATTGTAGTC
AAAGRGGAAGTG-----
 A C G T A C G T A C G T A C G T A C T G T A C G C T A G G T C A C T G A G A C T A C G T A C T G A C G T T G C A C T A G G A C T A G T C
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGGAATTGTAGTC
TTAAGAGGAAGTTA----
 A C G T A C G T A C G T A C G T A C G T A C T G T A C G C T A G G T C A C T G A G A C T A C G T A C T G A C G T T G C A C T A G G A C T A G T C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGGAATTGTAGTC
CSTGGGAAAD------
 A C G T A C G T A C G T A C T G T A C G C T A G G T C A C T G A G A C T A C G T A C T G A C G T T G C A C T A G G A C T A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGGAATTGTAGTC
AGAGGAAGTG-----
 A C G T A C G T A C T G T A C G C T A G G T C A C T G A G A C T A C G T A C T G A C G T T G C A C T A G G A C T A G T C
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGGAATTGTAGTC
GGCGGGAARN------
 A C G T A C G T A C G T A C T G T A C G C T A G G T C A C T G A G A C T A C G T A C T G A C G T T G C A C T A G G A C T A G T C
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T