Information for 15-TGTCTCTCTC (Motif 21)

C A G T C T A G C A G T T G A C A G C T A G T C C G A T T A G C C A G T A T G C
Reverse Opposite:
T A C G G T C A A T C G G C T A T A C G T C G A A C T G G T C A G A T C G T C A
p-value:1e-7
log p-value:-1.635e+01
Information Content per bp:1.657
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.56%
Number of Background Sequences with motif859.1
Percentage of Background Sequences with motif1.82%
Average Position of motif in Targets44.9 +/- 24.3bp
Average Position of motif in Background50.5 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGTCTCTCTC--
CTGTCTGTCACCT
 A C G T C A G T C T A G C A G T T G A C A G C T A G T C C G A T T A G C C A G T A T G C A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTCTCTCTC--
TGTCTGDCACCT
 C A G T C T A G C A G T T G A C A G C T A G T C C G A T T A G C C A G T A T G C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGTCTCTCTC------
-ACCACTCTCGGTCAC
 C A G T C T A G C A G T T G A C A G C T A G T C C G A T T A G C C A G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTCTCTCTC
NCTGTCAATCAN
 A C G T A C G T C A G T C T A G C A G T T G A C A G C T A G T C C G A T T A G C C A G T A T G C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGTCTCTCTC
SCTGTCAVTCAV
 A C G T A C G T C A G T C T A G C A G T T G A C A G C T A G T C C G A T T A G C C A G T A T G C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGTCTCTCTC
ACTTTCACTTTC
 A C G T A C G T C A G T C T A G C A G T T G A C A G C T A G T C C G A T T A G C C A G T A T G C
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGTCTCTCTC----
NNAGTCCCACTCNNNN
 A C G T A C G T C A G T C T A G C A G T T G A C A G C T A G T C C G A T T A G C C A G T A T G C A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGTCTCTCTC
ACTTTCACTTTC
 A C G T A C G T C A G T C T A G C A G T T G A C A G C T A G T C C G A T T A G C C A G T A T G C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGTCTCTCTC
GSCTGTCACTCA-
 A C G T A C G T A C G T C A G T C T A G C A G T T G A C A G C T A G T C C G A T T A G C C A G T A T G C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGTCTCTCTC------
-AGTATTCTCGGTTGC
 C A G T C T A G C A G T T G A C A G C T A G T C C G A T T A G C C A G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C