Information for 4-ATTGAAATTA (Motif 9)

C G T A C A G T C G A T T C A G G T C A G C T A G C T A C G A T G C A T G C T A
Reverse Opposite:
C G A T C G T A G C T A C G A T C G A T C A G T A G T C G C T A G T C A G C A T
p-value:1e-8
log p-value:-2.037e+01
Information Content per bp:1.664
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif340.4
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets57.3 +/- 27.2bp
Average Position of motif in Background49.3 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ATTGAAATTA
NATTCAAAT--
 A C G T C G T A C A G T C G A T T C A G G T C A G C T A G C T A C G A T G C A T G C T A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---ATTGAAATTA--
TTGAATGAAATTCGA
 A C G T A C G T A C G T C G T A C A G T C G A T T C A G G T C A G C T A G C T A C G A T G C A T G C T A A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----ATTGAAATTA--
NNTAATTATAATTNNN
 A C G T A C G T A C G T A C G T C G T A C A G T C G A T T C A G G T C A G C T A G C T A C G A T G C A T G C T A A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----ATTGAAATTA--
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T C G T A C A G T C G A T T C A G G T C A G C T A G C T A C G A T G C A T G C T A A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

Dlx2/MA0885.1/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:ATTGAAATTA-
---GCAATTAA
 C G T A C A G T C G A T T C A G G T C A G C T A G C T A C G A T G C A T G C T A A C G T
A C G T A C G T A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ATTGAAATTA
GAAAGTGAAAGT-
 A C G T A C G T A C G T C G T A C A G T C G A T T C A G G T C A G C T A G C T A C G A T G C A T G C T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATTGAAATTA------
NNNGGTAATTATNGNGN
 A C G T C G T A C A G T C G A T T C A G G T C A G C T A G C T A C G A T G C A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

PROP1/MA0715.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATTGAAATTA
TAATTTAATTA
 A C G T C G T A C A G T C G A T T C A G G T C A G C T A G C T A C G A T G C A T G C T A
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATTGAAATTA
CGGTTTCAAA---
 A C G T A C G T A C G T C G T A C A G T C G A T T C A G G T C A G C T A G C T A C G A T G C A T G C T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATTGAAATTA
ACTGAAACCA
 C G T A C A G T C G A T T C A G G T C A G C T A G C T A C G A T G C A T G C T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A