Information for 4-CGGCCCTTCTGTTCTC (Motif 3)

A T G C A C T G A C T G A G T C A G T C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T A G T C A G C T A T G C
Reverse Opposite:
A T C G C T G A T C A G G T C A C G T A A G T C C G T A A C T G C T G A C G T A A C T G A C T G A C T G A G T C T A G C A T C G
p-value:1e-10
log p-value:-2.493e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.2 +/- 13.6bp
Average Position of motif in Background64.3 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGGCCCTTCTGTTCTC
---ACCATCTGTT---
 A T G C A C T G A C T G A G T C A G T C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T A G T C A G C T A T G C
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGGCCCTTCTGTTCTC
---GCCATCTGTT---
 A T G C A C T G A C T G A G T C A G T C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T A G T C A G C T A T G C
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGCCCTTCTGTTCTC
-CCCCCTGCTGTG---
 A T G C A C T G A C T G A G T C A G T C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T A G T C A G C T A T G C
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGCCCTTCTGTTCTC
-NNTCCTGCTGTGNNN
 A T G C A C T G A C T G A G T C A G T C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T A G T C A G C T A T G C
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CGGCCCTTCTGTTCTC
---RCCATMTGTT---
 A T G C A C T G A C T G A G T C A G T C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T A G T C A G C T A T G C
A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CGGCCCTTCTGTTCTC--
---WCATTTTGKCCTCYT
 A T G C A C T G A C T G A G T C A G T C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T A G T C A G C T A T G C A C G T A C G T
A C G T A C G T A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CGGCCCTTCTGTTCTC
----CCTGCTGAGH--
 A T G C A C T G A C T G A G T C A G T C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T A G T C A G C T A T G C
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGGCCCTTCTGTTCTC
-GGNGCGNCTGTTNNN
 A T G C A C T G A C T G A G T C A G T C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T A G T C A G C T A T G C
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCCTTCTGTTCTC
CCNNACCATCTGGCCTN
 A C G T A T G C A C T G A C T G A G T C A G T C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T A G T C A G C T A T G C
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:CGGCCCTTCTGTTCTC--
--------CTGTTCCTGG
 A T G C A C T G A C T G A G T C A G T C A G T C A C G T A G C T A G T C A C G T A C T G A C G T A C G T A G T C A G C T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G