Information for 5-AGCAGVGCTBGGT (Motif 8)

C T G A A C T G A G T C C G T A A C T G T A C G C T A G A G T C A G C T A C G T A C T G A T C G A C G T
Reverse Opposite:
C G T A A T G C A G T C T C G A C T G A A C T G A G T C A G T C A G T C C G A T A C T G A G T C A G C T
p-value:1e-8
log p-value:-2.051e+01
Information Content per bp:1.849
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets65.0 +/- 15.0bp
Average Position of motif in Background49.0 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCAGVGCTBGGT
GGGGCTYGKCTGGGA
 A C G T A C G T C T G A A C T G A G T C C G T A A C T G T A C G C T A G A G T C A G C T A C G T A C T G A T C G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Klf12/MA0742.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGVGCTBGGT-
NANAAGGGCGTGGTC
 A C G T C T G A A C T G A G T C C G T A A C T G T A C G C T A G A G T C A G C T A C G T A C T G A T C G A C G T A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGCAGVGCTBGGT
-GCAGTGATTT--
 C T G A A C T G A G T C C G T A A C T G T A C G C T A G A G T C A G C T A C G T A C T G A T C G A C G T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGCAGVGCTBGGT---
--CAGGCCNNGGCCNN
 C T G A A C T G A G T C C G T A A C T G T A C G C T A G A G T C A G C T A C G T A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGCAGVGCTBGGT--
CGAACAGTGCTCACTAT
 A C G T A C G T C T G A A C T G A G T C C G T A A C T G T A C G C T A G A G T C A G C T A C G T A C T G A T C G A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGCAGVGCTBGGT------
---AGAGCGGGGTCAAGTA
 C T G A A C T G A G T C C G T A A C T G T A C G C T A G A G T C A G C T A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGCAGVGCTBGGT
---AGGCCTNG--
 C T G A A C T G A G T C C G T A A C T G T A C G C T A G A G T C A G C T A C G T A C T G A T C G A C G T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AGCAGVGCTBGGT---
NNAGGGGCGGGGTNNA
 C T G A A C T G A G T C C G T A A C T G T A C G C T A G A G T C A G C T A C G T A C T G A T C G A C G T A C G T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:AGCAGVGCTBGGT
CACAGN-------
 C T G A A C T G A G T C C G T A A C T G T A C G C T A G A G T C A G C T A C G T A C T G A T C G A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---AGCAGVGCTBGGT
CACAGCAGGGGG----
 A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G T A C G C T A G A G T C A G C T A C G T A C T G A T C G A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T