Information for 2-CCCSGGGACTCAM (Motif 4)

A G T C A G T C A G T C A T G C C T A G A C T G A C T G C T G A A G T C A C G T A T G C G T C A G T A C
Reverse Opposite:
C A T G A C G T A T C G T G C A A C T G A G C T A G T C A G T C A G T C A T C G A C T G A C T G A C T G
p-value:1e-10
log p-value:-2.483e+01
Information Content per bp:1.805
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif60.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets55.4 +/- 23.0bp
Average Position of motif in Background48.3 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCCSGGGACTCAM
TCCCCTGGGGAC---
 A C G T A C G T A G T C A G T C A G T C A T G C C T A G A C T G A C T G C T G A A G T C A C G T A T G C G T C A G T A C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCCSGGGACTCAM
TCCCNNGGGACN---
 A C G T A C G T A G T C A G T C A G T C A T G C C T A G A C T G A C T G C T G A A G T C A C G T A T G C G T C A G T A C
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCCSGGGACTCAM
TGCCCCCGGGCA---
 A C G T A C G T A G T C A G T C A G T C A T G C C T A G A C T G A C T G C T G A A G T C A C G T A T G C G T C A G T A C
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCCSGGGACTCAM
TGCCCCAGGGCA---
 A C G T A C G T A G T C A G T C A G T C A T G C C T A G A C T G A C T G C T G A A G T C A C G T A T G C G T C A G T A C
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCCSGGGACTCAM
TGCCCTNGGGCA---
 A C G T A C G T A G T C A G T C A G T C A T G C C T A G A C T G A C T G C T G A A G T C A C G T A T G C G T C A G T A C
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CCCSGGGACTCAM
ACCCCCCCGGGGGGN--
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A T G C C T A G A C T G A C T G C T G A A G T C A C G T A T G C G T C A G T A C
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCCSGGGACTCAM
NCCCCCCCGGGGGGN--
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A T G C C T A G A C T G A C T G C T G A A G T C A C G T A T G C G T C A G T A C
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCCSGGGACTCAM
ATTCCCAAGGGAAT---
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A T G C C T A G A C T G A C T G C T G A A G T C A C G T A T G C G T C A G T A C
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCCSGGGACTCAM
TCACCTCTGGGCAG--
 A C G T A C G T A C G T A G T C A G T C A G T C A T G C C T A G A C T G A C T G C T G A A G T C A C G T A T G C G T C A G T A C
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCCSGGGACTCAM
CCCCCCCGGGGGNN--
 A C G T A C G T A C G T A G T C A G T C A G T C A T G C C T A G A C T G A C T G C T G A A G T C A C G T A T G C G T C A G T A C
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T A C G T