Information for 3-AGAACTGTTC (Motif 10)

C G T A C T A G G T C A C T G A G T A C C G A T A T C G A G C T A C G T A T G C
Reverse Opposite:
T A C G G T C A C T G A T A G C C G T A A C T G A G C T A C G T A G T C C G A T
p-value:1e-8
log p-value:-1.899e+01
Information Content per bp:1.834
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif95.3
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets55.0 +/- 15.5bp
Average Position of motif in Background47.4 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYF6/MA0667.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGAACTGTTC
AACAGCTGTT-
 A C G T C G T A C T A G G T C A C T G A G T A C C G A T A T C G A G C T A C G T A T G C
T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGAACTGTTC---
CNGACACCTGTTCNNN
 A C G T A C G T A C G T C G T A C T A G G T C A C T G A G T A C C G A T A T C G A G C T A C G T A T G C A C G T A C G T A C G T
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

MSC/MA0665.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGAACTGTTC
AACAGCTGTT-
 A C G T C G T A C T A G G T C A C T G A G T A C C G A T A T C G A G C T A C G T A T G C
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------AGAACTGTTC-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G G T C A C T G A G T A C C G A T A T C G A G C T A C G T A T G C A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGAACTGTTC----
----CTGTTCCTGG
 C G T A C T A G G T C A C T G A G T A C C G A T A T C G A G C T A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGAACTGTTC----
AAAATTGTTATGAA
 C G T A C T A G G T C A C T G A G T A C C G A T A T C G A G C T A C G T A T G C A C G T A C G T A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGAACTGTTC----
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T C G T A C T A G G T C A C T G A G T A C C G A T A T C G A G C T A C G T A T G C A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGAACTGTTC----
AANTTATTGTTCTNNA
 A C G T A C G T C G T A C T A G G T C A C T G A G T A C C G A T A T C G A G C T A C G T A T G C A C G T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------AGAACTGTTC
TATCATTAGAACGCT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G G T C A C T G A G T A C C G A T A T C G A G C T A C G T A T G C
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGAACTGTTC
NHAACBGYYV
 C G T A C T A G G T C A C T G A G T A C C G A T A T C G A G C T A C G T A T G C
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A