Information for 5-CTGGTTTTAATTA (Motif 8)

A G T C C A G T A C T G A C T G A C G T G A C T A G C T A C G T G C T A C G T A A C G T C G A T C G T A
Reverse Opposite:
C G A T C G T A C G T A A C G T C A G T T C G A T C G A C G T A T G C A T G A C A G T C G C T A C T A G
p-value:1e-12
log p-value:-2.810e+01
Information Content per bp:1.776
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif40.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets53.8 +/- 26.2bp
Average Position of motif in Background46.2 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LMX1A/MA0702.1/Jaspar

Match Rank:1
Score:0.76
Offset:6
Orientation:reverse strand
Alignment:CTGGTTTTAATTA-
------TTAATTAA
 A G T C C A G T A C T G A C T G A C G T G A C T A G C T A C G T G C T A C G T A A C G T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T G C T A C G T A C G A T G A C T C T G A T C G A

PH0100.1_Lmx1a/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CTGGTTTTAATTA-----
-NNTTTTTAATTAATTCG
 A G T C C A G T A C T G A C T G A C G T G A C T A G C T A C G T G C T A C G T A A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

mix-a/MA0621.1/Jaspar

Match Rank:3
Score:0.75
Offset:4
Orientation:forward strand
Alignment:CTGGTTTTAATTA--
----AATTAATTAGT
 A G T C C A G T A C T G A C T G A C G T G A C T A G C T A C G T G C T A C G T A A C G T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CTGGTTTTAATTA-----
-NNNTTTTAATTAANNNN
 A G T C C A G T A C T G A C T G A C G T G A C T A G C T A C G T G C T A C G T A A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

MNX1/MA0707.1/Jaspar

Match Rank:5
Score:0.74
Offset:5
Orientation:reverse strand
Alignment:CTGGTTTTAATTA--
-----TTTAATTANN
 A G T C C A G T A C T G A C T G A C G T G A C T A G C T A C G T G C T A C G T A A C G T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C

PH0101.1_Lmx1b/Jaspar

Match Rank:6
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CTGGTTTTAATTA-----
-AGTTTTTAATTAATTTG
 A G T C C A G T A C T G A C T G A C G T G A C T A G C T A C G T G C T A C G T A A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

ALX3/MA0634.1/Jaspar

Match Rank:7
Score:0.74
Offset:5
Orientation:forward strand
Alignment:CTGGTTTTAATTA--
-----TCTAATTAAA
 A G T C C A G T A C T G A C T G A C G T G A C T A G C T A C G T G C T A C G T A A C G T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

Lhx4/MA0704.1/Jaspar

Match Rank:8
Score:0.74
Offset:6
Orientation:forward strand
Alignment:CTGGTTTTAATTA-
------TTAATTAA
 A G T C C A G T A C T G A C T G A C G T G A C T A G C T A C G T G C T A C G T A A C G T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T T G C A C G T A A C G T A G C T C T G A T C G A

LMX1B/MA0703.1/Jaspar

Match Rank:9
Score:0.74
Offset:6
Orientation:reverse strand
Alignment:CTGGTTTTAATTA-
------TTAATTAN
 A G T C C A G T A C T G A C T G A C G T G A C T A G C T A C G T G C T A C G T A A C G T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T G C T A G C T A C G A T G C A T C T G A T G C A

VSX1/MA0725.1/Jaspar

Match Rank:10
Score:0.73
Offset:6
Orientation:forward strand
Alignment:CTGGTTTTAATTA-
------CTAATTAT
 A G T C C A G T A C T G A C T G A C G T G A C T A G C T A C G T G C T A C G T A A C G T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T G T C A T C G A G A C T C A G T C T G A A C G T