Information for 4-TGCWGGGATTTSCCAR (Motif 7)

A C G T C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A C T A G
Reverse Opposite:
G A T C A C G T A C T G A C T G T A G C G T C A G T C A G T C A C G A T A G T C A G T C G T A C G C A T C T A G A G T C T G C A
p-value:1e-12
log p-value:-2.882e+01
Information Content per bp:1.737
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.0 +/- 21.5bp
Average Position of motif in Background44.6 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:forward strand
Alignment:TGCWGGGATTTSCCAR
----GGGGATTTCC--
 A C G T C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TGCWGGGATTTSCCAR
--NGGGGATTTCCC--
 A C G T C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A C T A G
A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TGCWGGGATTTSCCAR
----GGGAATTTCC--
 A C G T C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TGCWGGGATTTSCCAR
---GGGGATTTCC---
 A C G T C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A C T A G
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TGCWGGGATTTSCCAR
----GGGAATTTCC--
 A C G T C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.63
Offset:7
Orientation:forward strand
Alignment:TGCWGGGATTTSCCAR-
-------HTTTCCCASG
 A C G T C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.63
Offset:7
Orientation:forward strand
Alignment:TGCWGGGATTTSCCAR-
-------ATTTTCCATT
 A C G T C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.63
Offset:8
Orientation:forward strand
Alignment:TGCWGGGATTTSCCAR
--------TTTTCCA-
 A C G T C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.61
Offset:7
Orientation:forward strand
Alignment:TGCWGGGATTTSCCAR-
-------ATTTTCCATT
 A C G T C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCWGGGATTTSCCAR
TGCTGTGATTT-----
 A C G T C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A T C G A G T C A G T C C G T A C T A G
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T