Information for 10-ACAAAGAGGTACA (Motif 20)

C G T A A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C T G A C G T C G T A A G T C C G T A
Reverse Opposite:
C G A T A C T G A C G T C G T A A G T C G T A C A C G T T G A C A C G T A C G T A C G T A C T G A C G T
p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.937
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 11.2bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ACAAAGAGGTACA--
AGTAAACAAAAAAGAACANN
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C T G A C G T C G T A A G T C C G T A A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGAGGTACA
AGAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C T G A C G T C G T A A G T C C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACAAAGAGGTACA
ACAAAG-------
 C G T A A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C T G A C G T C G T A A G T C C G T A
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGAGGTACA
GGAACAAAGR------
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C T G A C G T C G T A A G T C C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGAGGTACA
VRRACAAWGG------
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C T G A C G T C G T A A G T C C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGAGGTACA
ATAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C T G A C G T C G T A A G T C C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGAGGTACA
AAACAGACAAAGGAAT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C T G A C G T C G T A A G T C C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGAGGTACA
AAAACAAAGG------
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C T G A C G T C G T A A G T C C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGAGGTACA
RACAAWGG------
 A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C T G A C G T C G T A A G T C C G T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACAAAGAGGTACA
ACAAAGGNBCCT-
 C G T A A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C T G A C G T C G T A A G T C C G T A
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T