Information for 9-CTAAATATTTAGT (Motif 18)

G T A C A C G T G T C A C G T A C G T A C G A T C G T A C G A T C A G T A C G T C T G A A C T G C G A T
Reverse Opposite:
C G T A G T A C A G C T C G T A G C T A C G T A C G A T C G T A C G A T C G A T A C G T C G T A A C T G
p-value:1e-9
log p-value:-2.100e+01
Information Content per bp:1.769
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif10.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.1 +/- 27.1bp
Average Position of motif in Background55.8 +/- 38.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0147.1_Pou3f2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTAAATATTTAGT---
GATAATTAATTAGTTTG
 A C G T G T A C A C G T G T C A C G T A C G T A C G A T C G T A C G A T C A G T A C G T C T G A A C T G C G A T A C G T A C G T A C G T
T A C G C G A T C G A T C G T A G C T A G A C T A G C T G C T A C G T A C G A T A C G T G C T A C T A G A C G T C A G T G A C T C T A G

PH0028.1_En1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTAAATATTTAGT--
GCGAACTAATTAATGC
 A C G T G T A C A C G T G T C A C G T A C G T A C G A T C G T A C G A T C A G T A C G T C T G A A C T G C G A T A C G T A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

PH0106.1_Msx1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTAAATATTTAGT----
-NNATTAATTAGTNGNN
 G T A C A C G T G T C A C G T A C G T A C G A T C G T A C G A T C A G T A C G T C T G A A C T G C G A T A C G T A C G T A C G T A C G T
A C G T C A T G C G T A T G C A G A C T G A C T C G T A C G T A A C G T A C G T C T G A C T A G G A C T C G A T C A T G A G T C T G C A

PH0154.1_Prrx1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTAAATATTTAGT---
ANNAGTTAATTAGTTAN
 A C G T G T A C A C G T G T C A C G T A C G T A C G A T C G T A C G A T C A G T A C G T C T G A A C T G C G A T A C G T A C G T A C G T
T C G A A T C G G A C T G T C A T C A G A G C T G A C T C T G A C T G A A G C T A C G T C T G A C T A G A G C T C A G T T G C A A T G C

PH0149.1_Pou3f4/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTAAATATTTAGT--
AATTAATTAATTAATTC
 A C G T A C G T G T A C A C G T G T C A C G T A C G T A C G A T C G T A C G A T C A G T A C G T C T G A A C T G C G A T A C G T A C G T
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

PH0132.1_Pax6/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTAAATATTTAGT--
GNNAATTAATTAATCA
 A C G T G T A C A C G T G T C A C G T A C G T A C G A T C G T A C G A T C A G T A C G T C T G A A C T G C G A T A C G T A C G T
C A T G G C A T A T G C T G C A T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T G A T C T C G A

PH0008.1_Barx2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTAAATATTTAGT----
-TAAGTAATTAGTTATA
 G T A C A C G T G T C A C G T A C G T A C G A T C G T A C G A T C A G T A C G T C T G A A C T G C G A T A C G T A C G T A C G T A C G T
A C G T C G A T G C T A T C G A A C T G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A G C T A C G T C T G A G A C T C T G A

PH0135.1_Phox2a/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTAAATATTTAGT--
CAGCATTAATTAGTAG
 A C G T G T A C A C G T G T C A C G T A C G T A C G A T C G T A C G A T C A G T A C G T C T G A A C T G C G A T A C G T A C G T
A G T C T C G A A C T G G T A C T C G A G A C T A G C T C G T A C T G A C G A T A C G T C T G A C T A G A G C T T C A G T A C G

POU6F1/MA0628.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTAAATATTTAGT
---ATTAATTAAT
 G T A C A C G T G T C A C G T A C G T A C G A T C G T A C G A T C A G T A C G T C T G A A C T G C G A T
A C G T A C G T A C G T T C G A G A C T G C A T G T C A G T C A A C G T C A G T C G T A C T G A A G C T

PH0142.1_Pou1f1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTAAATATTTAGT-
GANTTAATTAATTANNN
 A C G T A C G T A C G T G T A C A C G T G T C A C G T A C G T A C G A T C G T A C G A T C A G T A C G T C T G A A C T G C G A T A C G T
T A C G G C T A G A T C G C A T C G A T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G T C A G C T A A G C T G A T C