Information for 7-CTWMKTCWCM (Motif 5)

A T G C G A C T C G A T G T C A A C T G A G C T A T G C C G A T T A G C G T A C
Reverse Opposite:
C A T G A T C G G C T A A T C G T C G A T G A C A C G T G C T A C T G A T A C G
p-value:1e-14
log p-value:-3.298e+01
Information Content per bp:1.526
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.42%
Number of Background Sequences with motif236.0
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets51.6 +/- 24.7bp
Average Position of motif in Background48.4 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOSL1/MA0477.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTWMKTCWCM
NATGAGTCACC
 A C G T A T G C G A C T C G A T G T C A A C T G A G C T A T G C C G A T T A G C G T A C
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C

JUNB/MA0490.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTWMKTCWCM-
ATGAGTCATCN
 A T G C G A C T C G A T G T C A A C T G A G C T A T G C C G A T T A G C G T A C A C G T
T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

FOSL2/MA0478.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTWMKTCWCM-
NTGAGTCATCN
 A T G C G A C T C G A T G T C A A C T G A G C T A T G C C G A T T A G C G T A C A C G T
T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTWMKTCWCM--
BTGABTGACAGS
 A T G C G A C T C G A T G T C A A C T G A G C T A T G C C G A T T A G C G T A C A C G T A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTWMKTCWCM
TGCTGASTCAGC
 A C G T A C G T A T G C G A C T C G A T G T C A A C T G A G C T A T G C C G A T T A G C G T A C
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTWMKTCWCM--
NTGATTGACAGN
 A T G C G A C T C G A T G T C A A C T G A G C T A T G C C G A T T A G C G T A C A C G T A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTWMKTCWCM
TGCTGAGTCA--
 A C G T A C G T A T G C G A C T C G A T G T C A A C T G A G C T A T G C C G A T T A G C G T A C
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTWMKTCWCM----
ATGAGTCATNTNNT
 A T G C G A C T C G A T G T C A A C T G A G C T A T G C C G A T T A G C G T A C A C G T A C G T A C G T A C G T
T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T

PB0142.1_Jundm2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTWMKTCWCM--
ATTGATGAGTCACCAA
 A C G T A C G T A C G T A C G T A T G C G A C T C G A T G T C A A C T G A G C T A T G C C G A T T A G C G T A C A C G T A C G T
T G C A C A G T A C G T C T A G T C G A A G C T A C T G G T C A A T C G G A C T T G A C C T G A A G T C G T A C C T G A G T C A

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTWMKTCWCM
GATGAGTCAT-
 A C G T A T G C G A C T C G A T G T C A A C T G A G C T A T G C C G A T T A G C G T A C
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T A C G T