Information for 6-CAAACCACAG (Motif 4)

A T G C G T C A T C G A C T G A A G T C A G T C C G T A A G T C C T G A T C A G
Reverse Opposite:
A G T C A G C T A C T G C G A T A C T G T C A G A G C T A G C T A C G T T A C G
p-value:1e-14
log p-value:-3.337e+01
Information Content per bp:1.745
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.25%
Number of Background Sequences with motif573.7
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets49.8 +/- 28.1bp
Average Position of motif in Background50.5 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:CAAACCACAG
NAAACCACAG
 A T G C G T C A T C G A C T G A A G T C A G T C C G T A A G T C C T G A T C A G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:CAAACCACAG--
-AAACCACAGAN
 A T G C G T C A T C G A C T G A A G T C A G T C C G T A A G T C C T G A T C A G A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.93
Offset:0
Orientation:forward strand
Alignment:CAAACCACAG--
NWAACCACADNN
 A T G C G T C A T C G A C T G A A G T C A G T C C G T A A G T C C T G A T C A G A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.93
Offset:1
Orientation:forward strand
Alignment:CAAACCACAG-
-AAACCACANN
 A T G C G T C A T C G A C T G A A G T C A G T C C G T A A G T C C T G A T C A G A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:CAAACCACAG-
-AAACCACAGC
 A T G C G T C A T C G A C T G A A G T C A G T C C G T A A G T C C T G A T C A G A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.84
Offset:1
Orientation:forward strand
Alignment:CAAACCACAG-
-AAACCGCAAA
 A T G C G T C A T C G A C T G A A G T C A G T C C G T A A G T C C T G A T C A G A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.82
Offset:1
Orientation:forward strand
Alignment:CAAACCACAG
-AAACCGCAA
 A T G C G T C A T C G A C T G A A G T C A G T C C G T A A G T C C T G A T C A G
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CAAACCACAG--
-AAATCACAGCA
 A T G C G T C A T C G A C T G A A G T C A G T C C G T A A G T C C T G A T C A G A C G T A C G T
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CAAACCACAG
--ATCCAC--
 A T G C G T C A T C G A C T G A A G T C A G T C C G T A A G T C C T G A T C A G
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CAAACCACAG
TCCAATCCACA-
 A C G T A C G T A T G C G T C A T C G A C T G A A G T C A G T C C G T A A G T C C T G A T C A G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T