Information for 5-CCCCCACACGCAGGCG (Motif 20)

A G T C A G T C A G T C A G T C A G T C C G T A A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A G T C A C G T A C T G A G T C A C T G A C G T A C T G A C G T A C T G A C T G A C T G A C T G A C T G
p-value:1e-6
log p-value:-1.399e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.5 +/- 15.0bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF740/MA0753.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCCCACACGCAGGCG
CCCCCCCCAC-------
 A C G T A G T C A G T C A G T C A G T C A G T C C G T A A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C T G
T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCCCACACGCAGGCG
GACCCCCCACGAAG---
 A C G T A G T C A G T C A G T C A G T C A G T C C G T A A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C T G
A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CCCCCACACGCAGGCG
------CACGCA----
 A G T C A G T C A G T C A G T C A G T C C G T A A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCACACGCAGGCG
YCCGCCCACGCN------
 A C G T A C G T A G T C A G T C A G T C A G T C A G T C C G T A A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C T G
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCCCCACACGCAGGCG
AGACCCCCCACGAAGC--
 A C G T A C G T A G T C A G T C A G T C A G T C A G T C C G T A A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C T G
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCCCCACACGCAGGCG
CRCCCACGCA------
 A G T C A G T C A G T C A G T C A G T C C G T A A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C T G
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCCCCACACGCAGGCG-
------TGCGCAGGCGC
 A G T C A G T C A G T C A G T C A G T C C G T A A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCCCCACACGCAGGCG
--GCCACACCCA----
 A G T C A G T C A G T C A G T C A G T C C G T A A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C T G
A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCCCCACACGCAGGCG
-ACGCCCACGCA----
 A G T C A G T C A G T C A G T C A G T C C G T A A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C T G
A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCCCCACACGCAGGCG
GACCCCCCGCGAAG---
 A C G T A G T C A G T C A G T C A G T C A G T C C G T A A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C T G
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G A C G T A C G T A C G T