Information for 14-CTGTCTGCAGACA (Motif 18)

A G T C A C G T C A T G A C G T A G T C A C G T A C T G A G T C C G T A A C T G C G T A G A T C C G T A
Reverse Opposite:
A C G T C A T G A C G T A G T C A C G T A C T G A G T C C G T A A C T G C G T A G A T C C G T A C T A G
p-value:1e-7
log p-value:-1.668e+01
Information Content per bp:1.906
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 22.3bp
Average Position of motif in Background60.9 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTGTCTGCAGACA
CTGTCTGG-----
 A G T C A C G T C A T G A C G T A G T C A C G T A C T G A G T C C G T A A C T G C G T A G A T C C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTGCAGACA
VBSYGTCTGG-----
 A C G T A C G T A G T C A C G T C A T G A C G T A G T C A C G T A C T G A G T C C G T A A C T G C G T A G A T C C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTGTCTGCAGACA
CCATTGTATGCAAAT-
 A C G T A C G T A C G T A G T C A C G T C A T G A C G T A G T C A C G T A C T G A G T C C G T A A C T G C G T A G A T C C G T A
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGTCTGCAGACA
TWGTCTGV-----
 A G T C A C G T C A T G A C G T A G T C A C G T A C T G A G T C C G T A A C T G C G T A G A T C C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTGCAGACA
SCTGTCARCACC--
 A C G T A G T C A C G T C A T G A C G T A G T C A C G T A C T G A G T C C G T A A C T G C G T A G A T C C G T A
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTGTCTGCAGACA
--GTCAGCANNTN
 A G T C A C G T C A T G A C G T A G T C A C G T A C T G A G T C C G T A A C T G C G T A G A T C C G T A
A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCTGCAGACA
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C A C G T C A T G A C G T A G T C A C G T A C T G A G T C C G T A A C T G C G T A G A T C C G T A
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0104.1_Zscan4_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGTCTGCAGACA---
TACATGTGCACATAAAA
 A C G T A G T C A C G T C A T G A C G T A G T C A C G T A C T G A G T C C G T A A C T G C G T A G A T C C G T A A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGTCTGCAGACA----
--GTCWGCTGTYYCTCT
 A G T C A C G T C A T G A C G T A G T C A C G T A C T G A G T C C G T A A C T G C G T A G A T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGTCTGCAGACA---
CAGATGTGCACATACGT
 A C G T A G T C A C G T C A T G A C G T A G T C A C G T A C T G A G T C C G T A A C T G C G T A G A T C C G T A A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T