Information for 2-TSCTGSCTCCCTG (Motif 3)

A C G T A T G C A G T C A C G T A C T G A T C G A G T C A C G T G A T C A G T C A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C T G C A T G C G T A A C T G A T G C A G T C C G T A A C T G A T C G C G T A
p-value:1e-16
log p-value:-3.727e+01
Information Content per bp:1.927
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 28.9bp
Average Position of motif in Background38.8 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TSCTGSCTCCCTG-
GTCATGCHTGRCTGS
 A C G T A C G T A T G C A G T C A C G T A C T G A T C G A G T C A C G T G A T C A G T C A G T C A C G T A C T G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TSCTGSCTCCCTG
-----GCTCCG--
 A C G T A T G C A G T C A C G T A C T G A T C G A G T C A C G T G A T C A G T C A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TSCTGSCTCCCTG
TGCTGACTCA---
 A C G T A T G C A G T C A C G T A C T G A T C G A G T C A C G T G A T C A G T C A G T C A C G T A C T G
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TSCTGSCTCCCTG---
--CTGGCAGNCTGCCA
 A C G T A T G C A G T C A C G T A C T G A T C G A G T C A C G T G A T C A G T C A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

Spz1/MA0111.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TSCTGSCTCCCTG
-GCTGTTACCCT-
 A C G T A T G C A G T C A C G T A C T G A T C G A G T C A C G T G A T C A G T C A G T C A C G T A C T G
A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TSCTGSCTCCCTG--
CCTTCCTTCCTTCCTTCC
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C T G A T C G A G T C A C G T G A T C A G T C A G T C A C G T A C T G A C G T A C G T
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TSCTGSCTCCCTG-
----CACTTCCTGT
 A C G T A T G C A G T C A C G T A C T G A T C G A G T C A C G T G A T C A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TSCTGSCTCCCTG-
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A T G C A G T C A C G T A C T G A T C G A G T C A C G T G A T C A G T C A G T C A C G T A C T G A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------TSCTGSCTCCCTG
GNCTGTASTRNTGBCTCHTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C T G A T C G A G T C A C G T G A T C A G T C A G T C A C G T A C T G
C T A G G A C T G A T C A C G T A T C G A G C T C T G A A T C G C G A T C T A G G A T C G A C T C A T G A T C G G T A C G A C T A G T C G C A T A G C T C G A T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TSCTGSCTCCCTG--
-----ACTTCCTGTT
 A C G T A T G C A G T C A C G T A C T G A T C G A G T C A C G T G A T C A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T