Information for 13-TGACAAATGC (Motif 22)

G C A T A C T G C G T A T G A C C G T A C G T A T C G A A C G T A T C G A T G C
Reverse Opposite:
A T C G A T G C C G T A A G C T C G A T C G A T A C T G C G A T G T A C C G T A
p-value:1e-8
log p-value:-1.890e+01
Information Content per bp:1.747
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.03%
Number of Background Sequences with motif619.9
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets47.5 +/- 29.8bp
Average Position of motif in Background48.3 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bhlha15/MA0607.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGACAAATGC
--ACATATGG
 G C A T A C T G C G T A T G A C C G T A C G T A T C G A A C G T A T C G A T G C
A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

Hes2/MA0616.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TGACAAATGC
TAACGACACGTGC
 A C G T A C G T A C G T G C A T A C T G C G T A T G A C C G T A C G T A T C G A A C G T A T C G A T G C
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

NEUROG2/MA0669.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGACAAATGC-
-GACATATGTT
 G C A T A C T G C G T A T G A C C G T A C G T A T C G A A C G T A T C G A T G C A C G T
A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

Twist2/MA0633.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGACAAATGC-
-NACATATGGN
 G C A T A C T G C G T A T G A C C G T A C G T A T C G A A C G T A T C G A T G C A C G T
A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

Atoh1/MA0461.2/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGACAAATGC-
-AACATATGTT
 G C A T A C T G C G T A T G A C C G T A C G T A T C G A A C G T A T C G A T G C A C G T
A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGACAAATGC
TTGACAG----
 A C G T G C A T A C T G C G T A T G A C C G T A C G T A T C G A A C G T A T C G A T G C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGACAAATGC-
-GACACGTGCC
 G C A T A C T G C G T A T G A C C G T A C G T A T C G A A C G T A T C G A T G C A C G T
A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TGACAAATGC-
ACCGTGACTAATTNN
 A C G T A C G T A C G T A C G T G C A T A C T G C G T A T G A C C G T A C G T A T C G A A C G T A T C G A T G C A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

NEUROD2/MA0668.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGACAAATGC-
-GCCATATGGT
 G C A T A C T G C G T A T G A C C G T A C G T A T C G A A C G T A T C G A T G C A C G T
A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

HES5/MA0821.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGACAAATGC--
CGGCACGTGCCA
 G C A T A C T G C G T A T G A C C G T A C G T A T C G A A C G T A T C G A T G C A C G T A C G T
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A