p-value: | 1e-10 |
log p-value: | -2.491e+01 |
Information Content per bp: | 1.913 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.58% |
Number of Background Sequences with motif | 1.1 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 45.2 +/- 28.5bp |
Average Position of motif in Background | 87.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCCAGATG --TGACCTARTT- |
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PB0157.1_Rara_2/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTGACCCAGATG- NNCNTGACCCCGCTCT |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTGACCCAGATG- NNNNTGACCCGGCGCG |
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RORA/MA0071.1/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCCAGATG --TGACCTTGAT- |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 5 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTGACCCAGATG-- -TTGACCTANTTATN |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCCAGATG --TGACCT----- |
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ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 7 |
Score: | 0.63 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CCTGACCCAGATG-- -----TCCAGATGTT |
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SPDEF/MA0686.1/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCTGACCCAGATG-- ----ACCCGGATGTA |
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ZBTB18/MA0698.1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCTGACCCAGATG--- ---CATCCAGATGTTC |
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PB0193.1_Tcfe2a_2/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCTGACCCAGATG------ --AAGGCCAGATGGTCCGG |
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