Information for 5-RCRAGYTCCCAGMGCC (Motif 6)

C T A G A G T C C T G A C G T A A C T G A G T C A C G T A T G C A G T C G T A C C G T A A C T G G T A C A C T G A G T C G T A C
Reverse Opposite:
A C T G C T A G G T A C A C T G A G T C A C G T A C T G A C T G A T C G C G T A C T A G A G T C C G A T A G C T A C T G G A T C
p-value:1e-9
log p-value:-2.257e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.0 +/- 23.7bp
Average Position of motif in Background39.1 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:RCRAGYTCCCAGMGCC
---HTTTCCCASG---
 C T A G A G T C C T G A C G T A A C T G A G T C A C G T A T G C A G T C G T A C C G T A A C T G G T A C A C T G A G T C G T A C
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:forward strand
Alignment:RCRAGYTCCCAGMGCC
----GCTCCG------
 C T A G A G T C C T G A C G T A A C T G A G T C A C G T A T G C A G T C G T A C C G T A A C T G G T A C A C T G A G T C G T A C
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:RCRAGYTCCCAGMGCC--
---ATTTCCCAGVAKSCY
 C T A G A G T C C T G A C G T A A C T G A G T C A C G T A T G C A G T C G T A C C G T A A C T G G T A C A C T G A G T C G T A C A C G T A C G T
A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:RCRAGYTCCCAGMGCC
-----TGCCCAGNHW-
 C T A G A G T C C T G A C G T A A C T G A G T C A C G T A T G C A G T C G T A C C G T A A C T G G T A C A C T G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:RCRAGYTCCCAGMGCC
----GTCCCCAGGGGA
 C T A G A G T C C T G A C G T A A C T G A G T C A C G T A T G C A G T C G T A C C G T A A C T G G T A C A C T G A G T C G T A C
A C G T A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:RCRAGYTCCCAGMGCC
---ATTTCCAAGAA--
 C T A G A G T C C T G A C G T A A C T G A G T C A C G T A T G C A G T C G T A C C G T A A C T G G T A C A C T G A G T C G T A C
A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:RCRAGYTCCCAGMGCC
ACATGCTACCTAATAC
 C T A G A G T C C T G A C G T A A C T G A G T C A C G T A T G C A G T C G T A C C G T A A C T G G T A C A C T G A G T C G T A C
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:RCRAGYTCCCAGMGCC--
--NNNNTGCCAGTGATTG
 C T A G A G T C C T G A C G T A A C T G A G T C A C G T A T G C A G T C G T A C C G T A A C T G G T A C A C T G A G T C G T A C A C G T A C G T
A C G T A C G T G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.48
Offset:4
Orientation:forward strand
Alignment:RCRAGYTCCCAGMGCC
----GRTGMTRGAGCC
 C T A G A G T C C T G A C G T A A C T G A G T C A C G T A T G C A G T C G T A C C G T A A C T G G T A C A C T G A G T C G T A C
A C G T A C G T A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:RCRAGYTCCCAGMGCC
----TTTCCCAGAAN-
 C T A G A G T C C T G A C G T A A C T G A G T C A C G T A T G C A G T C G T A C C G T A A C T G G T A C A C T G A G T C G T A C
A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T