Information for 7-CGGCCAGGGGGAG (Motif 3)

A G T C C T A G A C T G A G T C A G T C C G T A C T A G C T A G A C T G A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C G T A C A G T C A G T C A G T C A C G T A C T G A C T G G T A C A G T C A C T G
p-value:1e-11
log p-value:-2.717e+01
Information Content per bp:1.903
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.1 +/- 12.7bp
Average Position of motif in Background54.9 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGCCAGGGGGAG
-TGTCAGGGGGCG
 A G T C C T A G A C T G A G T C A G T C C G T A C T A G C T A G A C T G A C T G A C T G C G T A A C T G
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCAGGGGGAG------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C C T A G A C T G A G T C A G T C C G T A C T A G C T A G A C T G A C T G A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CGGCCAGGGGGAG
------TGGGGA-
 A G T C C T A G A C T G A G T C A G T C C G T A C T A G C T A G A C T G A C T G A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGGCCAGGGGGAG-----
-NNNAAGGGGGCGGGNNN
 A G T C C T A G A C T G A G T C A G T C C G T A C T A G C T A G A C T G A C T G A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCAGGGGGAG
CCCCCCCGGGGGNN
 A C G T A G T C C T A G A C T G A G T C A G T C C G T A C T A G C T A G A C T G A C T G A C T G C G T A A C T G
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGGCCAGGGGGAG
---GGAGGGGGAA
 A G T C C T A G A C T G A G T C A G T C C G T A C T A G C T A G A C T G A C T G A C T G C G T A A C T G
A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGGCCAGGGGGAG
NCCCCCCCGGGGGGN
 A C G T A C G T A G T C C T A G A C T G A G T C A G T C C G T A C T A G C T A G A C T G A C T G A C T G C G T A A C T G
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGGCCAGGGGGAG
ACCCCCCCGGGGGGN
 A C G T A C G T A G T C C T A G A C T G A G T C A G T C C G T A C T A G C T A G A C T G A C T G A C T G C G T A A C T G
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CGGCCAGGGGGAG---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C C T A G A C T G A G T C A G T C C G T A C T A G C T A G A C T G A C T G A C T G C G T A A C T G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGGCCAGGGGGAG
TGCCCNGGGGCA-
 A G T C C T A G A C T G A G T C A G T C C G T A C T A G C T A G A C T G A C T G A C T G C G T A A C T G
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T