Information for 8-AGGCTGTATT (Motif 7)

G T C A A T C G A C T G A G T C C G A T C T A G A C G T G T C A A C G T A C G T
Reverse Opposite:
C G T A G T C A A C G T T G C A A G T C C G T A A C T G A G T C A T G C A C G T
p-value:1e-11
log p-value:-2.589e+01
Information Content per bp:1.843
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif47.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets55.3 +/- 30.0bp
Average Position of motif in Background56.1 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGGCTGTATT----
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T G T C A A T C G A C T G A G T C C G A T C T A G A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGGCTGTATT----
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T G T C A A T C G A C T G A G T C C G A T C T A G A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGGCTGTATT----
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T G T C A A T C G A C T G A G T C C G A T C T A G A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGCTGTATT
-NGCTN----
 G T C A A T C G A C T G A G T C C G A T C T A G A C G T G T C A A C G T A C G T
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGGCTGTATT
--GCTGTG--
 G T C A A T C G A C T G A G T C C G A T C T A G A C G T G T C A A C G T A C G T
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGCTGTATT------
GGACTGAATTCATGCC
 G T C A A T C G A C T G A G T C C G A T C T A G A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGCTGTATT--------
---CCGTATTATAAACAA
 G T C A A T C G A C T G A G T C C G A T C T A G A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGGCTGTATT
TWGTCTGV---
 A C G T G T C A A T C G A C T G A G T C C G A T C T A G A C G T G T C A A C G T A C G T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AGGCTGTATT-
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A C G T A C G T G T C A A T C G A C T G A G T C C G A T C T A G A C G T G T C A A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PB0106.1_Arid5a_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGGCTGTATT-----
TNNTTTCGTATTNNANN
 A C G T A C G T G T C A A T C G A C T G A G T C C G A T C T A G A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G