Information for 6-RTGATTTTGMATT (Motif 6)

C T A G A C G T C T A G C G T A A C G T A C G T A G C T C G A T C A T G G T A C C G T A G A C T A C G T
Reverse Opposite:
C G T A C T G A A C G T C A T G G T A C G C T A C T G A T G C A T G C A G C A T A G T C G T C A A G T C
p-value:1e-11
log p-value:-2.672e+01
Information Content per bp:1.683
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.8 +/- 31.5bp
Average Position of motif in Background51.4 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:RTGATTTTGMATT
----ATTTGAATT
 C T A G A C G T C T A G C G T A A C G T A C G T A G C T C G A T C A T G G T A C C G T A G A C T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PB0171.1_Sox18_2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:RTGATTTTGMATT------
---GGACTGAATTCATGCC
 C T A G A C G T C T A G C G T A A C G T A C G T A G C T C G A T C A T G G T A C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:RTGATTTTGMATT---
-----TGTGGATTNNN
 C T A G A C G T C T A G C G T A A C G T A C G T A G C T C G A T C A T G G T A C C G T A G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

MAF::NFE2/MA0501.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:RTGATTTTGMATT--
ATGACTCAGCAATTT
 C T A G A C G T C T A G C G T A A C G T A C G T A G C T C G A T C A T G G T A C C G T A G A C T A C G T A C G T A C G T
T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A C A T G A T G C C T G A C T G A C G A T G C A T G A C T

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:RTGATTTTGMATT----
-NNNTATTGAATTGNNN
 C T A G A C G T C T A G C G T A A C G T A C G T A G C T C G A T C A T G G T A C C G T A G A C T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:RTGATTTTGMATT--
---NNTGTGGATTSS
 C T A G A C G T C T A G C G T A A C G T A C G T A G C T C G A T C A T G G T A C C G T A G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

CEBPA/MA0102.3/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:RTGATTTTGMATT
--NATTGTGCAAT
 C T A G A C G T C T A G C G T A A C G T A C G T A G C T C G A T C A T G G T A C C G T A G A C T A C G T
A C G T A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RTGATTTTGMATT-
-TTCATTTGCATAT
 C T A G A C G T C T A G C G T A A C G T A C G T A G C T C G A T C A T G G T A C C G T A G A C T A C G T A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Nfe2l2/MA0150.2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----RTGATTTTGMATT
CAGCATGACTCAGCA--
 A C G T A C G T A C G T A C G T C T A G A C G T C T A G C G T A A C G T A C G T A G C T C G A T C A T G G T A C C G T A G A C T A C G T
G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:RTGATTTTGMATT
---ATTTTCCATT
 C T A G A C G T C T A G C G T A A C G T A C G T A G C T C G A T C A T G G T A C C G T A G A C T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T