Information for 4-GGYCCGKCAGGGG (Motif 6)

A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C T G A C T G C T A G
Reverse Opposite:
A G T C A G T C A G T C A G T C A C G T A C T G G T C A A G T C A C T G A C T G T C A G A G T C A G T C
p-value:1e-12
log p-value:-2.777e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 26.0bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGYCCGKCAGGGG
GGGGCTYGKCTGGGA
 A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C T G A C T G C T A G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGYCCGKCAGGGG---
-DCHCAGCAGGRGGCC
 A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C T G A C T G C T A G A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

INSM1/MA0155.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGYCCGKCAGGGG---
----TGTCAGGGGGCG
 A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C T G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGYCCGKCAGGGG-
--CACAGCAGGGGG
 A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C T G A C T G C T A G A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGYCCGKCAGGGG---------
--GCCASCAGGGGGCGCYVNNG
 A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C T G A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGYCCGKCAGGGG
GGGGCCCAAGGGGG
 A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C T G A C T G C T A G
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGYCCGKCAGGGG---
-NCNCAGCGGGGGGTC
 A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C T G A C T G C T A G A C G T A C G T A C G T
A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGYCCGKCAGGGG---
-NCGCAGCGGGGGGTC
 A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C T G A C T G C T A G A C G T A C G T A C G T
A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GGYCCGKCAGGGG---
----SDGCAGGTGCNS
 A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C T G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Gabpa/MA0062.2/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGYCCGKCAGGGG-
---CCGGAAGTGGC
 A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C T G A C T G C T A G A C G T
A C G T A C G T A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C