p-value: | 1e-7 |
log p-value: | -1.650e+01 |
Information Content per bp: | 1.735 |
Number of Target Sequences with motif | 21.0 |
Percentage of Target Sequences with motif | 4.27% |
Number of Background Sequences with motif | 495.1 |
Percentage of Background Sequences with motif | 1.02% |
Average Position of motif in Targets | 50.7 +/- 29.9bp |
Average Position of motif in Background | 50.1 +/- 27.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.10 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0055.1_Rfx4_1/Jaspar
Match Rank: | 1 |
Score: | 0.74 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTCGCTATGG-- NNCGTTGCTATGGNN |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 2 |
Score: | 0.71 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------GTCGCTATGG------ NTNNNNNGTTGCTANGGNNCANA |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 3 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTCGCTATGG---- GTTGCCATGGNAAC |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 4 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTCGCTATGG CTGTTGCTAGGS |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTCGCTATGG-- NCCGTTGCTANGNGN |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 6 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTCGCTATGG--- NGTTGCCATGGCAA |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 7 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTCGCTATGG---- KGTTGCCATGGCAAC |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 8 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTCGCTATGG--- GGTTGCCATGGCAA |
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RFX3/MA0798.1/Jaspar
Match Rank: | 9 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTCGCTATGG----- CGTTGCCATGGCAACN |
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RFX4/MA0799.1/Jaspar
Match Rank: | 10 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTCGCTATGG----- CGTTGCCATGGCAACG |
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