Information for 3-YACGCGWCCM (Motif 20)

A G T C C G T A T A G C T C A G G T A C A T C G C G T A A G T C A T G C T G C A
Reverse Opposite:
A C G T A T C G A C T G C G A T A T G C A C T G A G T C A C T G A C G T C T A G
p-value:1e-8
log p-value:-1.976e+01
Information Content per bp:1.742
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif7.11%
Number of Background Sequences with motif1070.9
Percentage of Background Sequences with motif2.21%
Average Position of motif in Targets39.9 +/- 23.8bp
Average Position of motif in Background49.9 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes1/MA1099.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--YACGCGWCCM
GGCACGCGTC--
 A C G T A C G T A G T C C G T A T A G C T C A G G T A C A T C G C G T A A G T C A T G C T G C A
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----YACGCGWCCM
GTGCCACGCGACTG
 A C G T A C G T A C G T A C G T A G T C C G T A T A G C T C A G G T A C A T C G C G T A A G T C A T G C T G C A
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:YACGCGWCCM
CACGCA----
 A G T C C G T A T A G C T C A G G T A C A T C G C G T A A G T C A T G C T G C A
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-YACGCGWCCM-
TCACGTGACCGG
 A C G T A G T C C G T A T A G C T C A G G T A C A T C G C G T A A G T C A T G C T G C A A C G T
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

USF1/MA0093.2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--YACGCGWCCM
GCCACGTGACC-
 A C G T A C G T A G T C C G T A T A G C T C A G G T A C A T C G C G T A A G T C A T G C T G C A
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----YACGCGWCCM
CNGTCACGCCAC--
 A C G T A C G T A C G T A C G T A G T C C G T A T A G C T C A G G T A C A T C G C G T A A G T C A T G C T G C A
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--YACGCGWCCM
GGCACGTGNC--
 A C G T A C G T A G T C C G T A T A G C T C A G G T A C A T C G C G T A A G T C A T G C T G C A
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YACGCGWCCM
TCACGTGACC-
 A C G T A G T C C G T A T A G C T C A G G T A C A T C G C G T A A G T C A T G C T G C A
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T

TFEB/MA0692.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--YACGCGWCCM
ATCACGTGAC--
 A C G T A C G T A G T C C G T A T A G C T C A G G T A C A T C G C G T A A G T C A T G C T G C A
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--YACGCGWCCM
ATCACGTGAC--
 A C G T A C G T A G T C C G T A T A G C T C A G G T A C A T C G C G T A A G T C A T G C T G C A
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T