Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-296 | -6.832e+02 | 0.0000 | 410.0 | 51.06% | 2324.3 | 5.16% | motif file (matrix) |
svg |
2 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-277 | -6.381e+02 | 0.0000 | 285.0 | 35.49% | 803.1 | 1.78% | motif file (matrix) |
svg |
3 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-226 | -5.207e+02 | 0.0000 | 172.0 | 21.42% | 200.3 | 0.44% | motif file (matrix) |
svg |
4 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-221 | -5.111e+02 | 0.0000 | 288.0 | 35.87% | 1321.0 | 2.93% | motif file (matrix) |
svg |
5 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-201 | -4.645e+02 | 0.0000 | 289.0 | 35.99% | 1585.7 | 3.52% | motif file (matrix) |
svg |
6 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-176 | -4.059e+02 | 0.0000 | 415.0 | 51.68% | 4989.3 | 11.08% | motif file (matrix) |
svg |
7 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-154 | -3.566e+02 | 0.0000 | 203.0 | 25.28% | 896.9 | 1.99% | motif file (matrix) |
svg |
8 |
| E-box(bHLH)/Promoter/Homer | 1e-142 | -3.290e+02 | 0.0000 | 127.0 | 15.82% | 225.1 | 0.50% | motif file (matrix) |
svg |
9 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-119 | -2.740e+02 | 0.0000 | 208.0 | 25.90% | 1482.5 | 3.29% | motif file (matrix) |
svg |
10 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-116 | -2.680e+02 | 0.0000 | 192.0 | 23.91% | 1244.0 | 2.76% | motif file (matrix) |
svg |
11 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-116 | -2.678e+02 | 0.0000 | 203.0 | 25.28% | 1439.7 | 3.20% | motif file (matrix) |
svg |
12 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-112 | -2.600e+02 | 0.0000 | 179.0 | 22.29% | 1081.4 | 2.40% | motif file (matrix) |
svg |
13 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-112 | -2.579e+02 | 0.0000 | 154.0 | 19.18% | 721.5 | 1.60% | motif file (matrix) |
svg |
14 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-108 | -2.488e+02 | 0.0000 | 209.0 | 26.03% | 1717.4 | 3.81% | motif file (matrix) |
svg |
15 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-108 | -2.488e+02 | 0.0000 | 199.0 | 24.78% | 1520.6 | 3.38% | motif file (matrix) |
svg |
16 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-105 | -2.419e+02 | 0.0000 | 183.0 | 22.79% | 1279.8 | 2.84% | motif file (matrix) |
svg |
17 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-101 | -2.336e+02 | 0.0000 | 250.0 | 31.13% | 2822.8 | 6.27% | motif file (matrix) |
svg |
18 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-100 | -2.304e+02 | 0.0000 | 209.0 | 26.03% | 1897.4 | 4.21% | motif file (matrix) |
svg |
19 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-98 | -2.278e+02 | 0.0000 | 128.0 | 15.94% | 529.6 | 1.18% | motif file (matrix) |
svg |
20 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-98 | -2.269e+02 | 0.0000 | 302.0 | 37.61% | 4376.4 | 9.72% | motif file (matrix) |
svg |
21 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-93 | -2.163e+02 | 0.0000 | 191.0 | 23.79% | 1660.0 | 3.69% | motif file (matrix) |
svg |
22 |
| CRE(bZIP)/Promoter/Homer | 1e-40 | -9.411e+01 | 0.0000 | 86.0 | 10.71% | 747.5 | 1.66% | motif file (matrix) |
svg |
23 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-40 | -9.346e+01 | 0.0000 | 69.0 | 8.59% | 445.9 | 0.99% | motif file (matrix) |
svg |
24 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-14 | -3.285e+01 | 0.0000 | 20.0 | 2.49% | 99.4 | 0.22% | motif file (matrix) |
svg |
25 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-14 | -3.230e+01 | 0.0000 | 20.0 | 2.49% | 102.1 | 0.23% | motif file (matrix) |
svg |
26 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-12 | -2.973e+01 | 0.0000 | 36.0 | 4.48% | 439.7 | 0.98% | motif file (matrix) |
svg |
27 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-12 | -2.941e+01 | 0.0000 | 34.0 | 4.23% | 396.1 | 0.88% | motif file (matrix) |
svg |
28 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-11 | -2.534e+01 | 0.0000 | 61.0 | 7.60% | 1277.4 | 2.84% | motif file (matrix) |
svg |
29 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-10 | -2.470e+01 | 0.0000 | 60.0 | 7.47% | 1264.5 | 2.81% | motif file (matrix) |
svg |
30 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-10 | -2.409e+01 | 0.0000 | 18.0 | 2.24% | 126.6 | 0.28% | motif file (matrix) |
svg |
31 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-9 | -2.125e+01 | 0.0000 | 113.0 | 14.07% | 3470.7 | 7.71% | motif file (matrix) |
svg |
32 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-8 | -2.010e+01 | 0.0000 | 73.0 | 9.09% | 1913.5 | 4.25% | motif file (matrix) |
svg |
33 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-8 | -1.977e+01 | 0.0000 | 50.0 | 6.23% | 1087.4 | 2.41% | motif file (matrix) |
svg |
34 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-8 | -1.918e+01 | 0.0000 | 68.0 | 8.47% | 1764.1 | 3.92% | motif file (matrix) |
svg |
35 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-7 | -1.733e+01 | 0.0000 | 67.0 | 8.34% | 1813.8 | 4.03% | motif file (matrix) |
svg |
36 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-6 | -1.505e+01 | 0.0000 | 113.0 | 14.07% | 3903.6 | 8.67% | motif file (matrix) |
svg |
37 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-6 | -1.494e+01 | 0.0000 | 75.0 | 9.34% | 2265.0 | 5.03% | motif file (matrix) |
svg |
38 |
| RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer | 1e-6 | -1.464e+01 | 0.0000 | 54.0 | 6.72% | 1440.3 | 3.20% | motif file (matrix) |
svg |
39 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-5 | -1.357e+01 | 0.0000 | 54.0 | 6.72% | 1493.9 | 3.32% | motif file (matrix) |
svg |
40 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.298e+01 | 0.0000 | 32.0 | 3.99% | 702.1 | 1.56% | motif file (matrix) |
svg |
41 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-5 | -1.291e+01 | 0.0000 | 115.0 | 14.32% | 4175.9 | 9.27% | motif file (matrix) |
svg |
42 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-5 | -1.276e+01 | 0.0000 | 216.0 | 26.90% | 9091.2 | 20.19% | motif file (matrix) |
svg |
43 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-5 | -1.253e+01 | 0.0000 | 60.0 | 7.47% | 1791.2 | 3.98% | motif file (matrix) |
svg |
44 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-5 | -1.242e+01 | 0.0000 | 31.0 | 3.86% | 687.4 | 1.53% | motif file (matrix) |
svg |
45 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-5 | -1.221e+01 | 0.0000 | 35.0 | 4.36% | 837.0 | 1.86% | motif file (matrix) |
svg |
46 |
| X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-5 | -1.197e+01 | 0.0001 | 14.0 | 1.74% | 179.8 | 0.40% | motif file (matrix) |
svg |
47 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-5 | -1.169e+01 | 0.0001 | 45.0 | 5.60% | 1237.0 | 2.75% | motif file (matrix) |
svg |
48 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-4 | -1.140e+01 | 0.0001 | 57.0 | 7.10% | 1736.2 | 3.86% | motif file (matrix) |
svg |
49 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-4 | -1.079e+01 | 0.0002 | 76.0 | 9.46% | 2594.4 | 5.76% | motif file (matrix) |
svg |
50 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-4 | -1.050e+01 | 0.0002 | 81.0 | 10.09% | 2840.6 | 6.31% | motif file (matrix) |
svg |
51 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-4 | -9.948e+00 | 0.0003 | 12.0 | 1.49% | 163.0 | 0.36% | motif file (matrix) |
svg |
52 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-4 | -9.552e+00 | 0.0005 | 12.0 | 1.49% | 169.1 | 0.38% | motif file (matrix) |
svg |
53 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-4 | -9.531e+00 | 0.0005 | 53.0 | 6.60% | 1689.5 | 3.75% | motif file (matrix) |
svg |
54 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-4 | -9.265e+00 | 0.0006 | 42.0 | 5.23% | 1248.7 | 2.77% | motif file (matrix) |
svg |
55 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-4 | -9.225e+00 | 0.0007 | 53.0 | 6.60% | 1710.0 | 3.80% | motif file (matrix) |
svg |
56 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-3 | -9.036e+00 | 0.0008 | 20.0 | 2.49% | 426.1 | 0.95% | motif file (matrix) |
svg |
57 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.868e+00 | 0.0009 | 96.0 | 11.96% | 3684.3 | 8.18% | motif file (matrix) |
svg |
58 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-3 | -8.774e+00 | 0.0010 | 15.0 | 1.87% | 272.1 | 0.60% | motif file (matrix) |
svg |
59 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-3 | -8.528e+00 | 0.0012 | 61.0 | 7.60% | 2111.5 | 4.69% | motif file (matrix) |
svg |
60 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -8.472e+00 | 0.0013 | 119.0 | 14.82% | 4831.2 | 10.73% | motif file (matrix) |
svg |
61 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.289e+00 | 0.0015 | 42.0 | 5.23% | 1308.1 | 2.90% | motif file (matrix) |
svg |
62 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-3 | -8.275e+00 | 0.0015 | 82.0 | 10.21% | 3090.1 | 6.86% | motif file (matrix) |
svg |
63 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-3 | -8.055e+00 | 0.0018 | 20.0 | 2.49% | 460.1 | 1.02% | motif file (matrix) |
svg |
64 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-3 | -7.882e+00 | 0.0021 | 73.0 | 9.09% | 2712.6 | 6.02% | motif file (matrix) |
svg |
65 |
| Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -7.833e+00 | 0.0022 | 17.0 | 2.12% | 364.4 | 0.81% | motif file (matrix) |
svg |
66 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-3 | -7.770e+00 | 0.0023 | 73.0 | 9.09% | 2723.3 | 6.05% | motif file (matrix) |
svg |
67 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-3 | -7.658e+00 | 0.0026 | 64.0 | 7.97% | 2321.8 | 5.16% | motif file (matrix) |
svg |
68 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.497e+00 | 0.0030 | 39.0 | 4.86% | 1234.1 | 2.74% | motif file (matrix) |
svg |
69 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.363e+00 | 0.0033 | 33.0 | 4.11% | 993.6 | 2.21% | motif file (matrix) |
svg |
70 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-3 | -7.101e+00 | 0.0043 | 22.0 | 2.74% | 572.9 | 1.27% | motif file (matrix) |
svg |
71 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-3 | -7.100e+00 | 0.0043 | 36.0 | 4.48% | 1134.9 | 2.52% | motif file (matrix) |
svg |
72 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-3 | -6.964e+00 | 0.0048 | 36.0 | 4.48% | 1143.8 | 2.54% | motif file (matrix) |
svg |
73 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-3 | -6.924e+00 | 0.0049 | 76.0 | 9.46% | 2951.3 | 6.55% | motif file (matrix) |
svg |
74 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -6.887e+00 | 0.0050 | 40.0 | 4.98% | 1319.7 | 2.93% | motif file (matrix) |
svg |
75 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -6.666e+00 | 0.0062 | 37.0 | 4.61% | 1206.2 | 2.68% | motif file (matrix) |
svg |
76 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-2 | -6.571e+00 | 0.0067 | 39.0 | 4.86% | 1299.3 | 2.89% | motif file (matrix) |
svg |
77 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-2 | -6.410e+00 | 0.0078 | 60.0 | 7.47% | 2257.4 | 5.01% | motif file (matrix) |
svg |
78 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-2 | -6.323e+00 | 0.0084 | 31.0 | 3.86% | 975.1 | 2.17% | motif file (matrix) |
svg |
79 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.154e+00 | 0.0098 | 33.0 | 4.11% | 1071.1 | 2.38% | motif file (matrix) |
svg |
80 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -6.100e+00 | 0.0102 | 90.0 | 11.21% | 3723.8 | 8.27% | motif file (matrix) |
svg |
81 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.779e+00 | 0.0139 | 26.0 | 3.24% | 802.0 | 1.78% | motif file (matrix) |
svg |
82 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.756e+00 | 0.0140 | 85.0 | 10.59% | 3525.5 | 7.83% | motif file (matrix) |
svg |
83 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.748e+00 | 0.0140 | 32.0 | 3.99% | 1057.6 | 2.35% | motif file (matrix) |
svg |
84 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.634e+00 | 0.0155 | 36.0 | 4.48% | 1240.2 | 2.75% | motif file (matrix) |
svg |
85 |
| GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.612e+00 | 0.0157 | 7.0 | 0.87% | 108.6 | 0.24% | motif file (matrix) |
svg |
86 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.457e+00 | 0.0180 | 24.0 | 2.99% | 739.0 | 1.64% | motif file (matrix) |
svg |
87 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -5.450e+00 | 0.0180 | 26.0 | 3.24% | 822.4 | 1.83% | motif file (matrix) |
svg |
88 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.371e+00 | 0.0192 | 35.0 | 4.36% | 1217.6 | 2.70% | motif file (matrix) |
svg |
89 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -5.284e+00 | 0.0208 | 22.0 | 2.74% | 666.8 | 1.48% | motif file (matrix) |
svg |
90 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -5.231e+00 | 0.0216 | 28.0 | 3.49% | 922.3 | 2.05% | motif file (matrix) |
svg |
91 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.166e+00 | 0.0228 | 32.0 | 3.99% | 1101.9 | 2.45% | motif file (matrix) |
svg |
92 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -4.964e+00 | 0.0276 | 21.0 | 2.62% | 644.5 | 1.43% | motif file (matrix) |
svg |
93 |
| YY1(Zf)/Promoter/Homer | 1e-2 | -4.937e+00 | 0.0281 | 8.0 | 1.00% | 154.0 | 0.34% | motif file (matrix) |
svg |
94 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -4.805e+00 | 0.0317 | 190.0 | 23.66% | 9072.4 | 20.15% | motif file (matrix) |
svg |
95 |
| PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-2 | -4.617e+00 | 0.0379 | 11.0 | 1.37% | 268.0 | 0.60% | motif file (matrix) |
svg |