Information for 14-GGGCAGGTTTGGC (Motif 17)

A C T G A C T G A C T G A G T C C T G A A C T G C T A G A C G T A C G T A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G G T A C G T A C C G T A G T C A C G T A A G T C A G T C A G C T A C T G A G T C A G T C A G T C
p-value:1e-8
log p-value:-1.949e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.6 +/- 25.3bp
Average Position of motif in Background49.0 +/- 4.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGGTTTGGC
TNNGGGCAG-------
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C T G A A C T G C T A G A C G T A C G T A C G T A C T G A C T G A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGGCAGGTTTGGC
---CAGGTGAGG-
 A C T G A C T G A C T G A G T C C T G A A C T G C T A G A C G T A C G T A C G T A C T G A C T G A G T C
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGCAGGTTTGGC
-AACAGGTGT---
 A C T G A C T G A C T G A G T C C T G A A C T G C T A G A C G T A C G T A C G T A C T G A C T G A G T C
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGCAGGTTTGGC
SDGCAGGTGCNS-
 A C T G A C T G A C T G A G T C C T G A A C T G C T A G A C G T A C G T A C G T A C T G A C T G A G T C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GGGCAGGTTTGGC---
-------NTTGGCANN
 A C T G A C T G A C T G A G T C C T G A A C T G C T A G A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGGTTTGGC
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C T G A A C T G C T A G A C G T A C G T A C G T A C T G A C T G A G T C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.57
Offset:8
Orientation:forward strand
Alignment:GGGCAGGTTTGGC-
--------TTGGCA
 A C T G A C T G A C T G A G T C C T G A A C T G C T A G A C G T A C G T A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGGCAGGTTTGGC
-NNCAGGTGCG--
 A C T G A C T G A C T G A G T C C T G A A C T G C T A G A C G T A C G T A C G T A C T G A C T G A G T C
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGGCAGGTTTGGC
-GACAGGTGTN--
 A C T G A C T G A C T G A G T C C T G A A C T G C T A G A C G T A C G T A C G T A C T G A C T G A G T C
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGGCAGGTTTGGC
-NNCAGGTGNN--
 A C T G A C T G A C T G A G T C C T G A A C T G C T A G A C G T A C G T A C G T A C T G A C T G A G T C
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T