Information for 11-CGTGCTCTGCGGC (Motif 13)

A G T C T A C G A G C T C T A G G T A C A C G T A G T C A C G T A C T G A G T C C T A G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C T A G A G T C C G T A A C T G G T C A A C T G A G T C C T G A A T G C A C T G
p-value:1e-9
log p-value:-2.150e+01
Information Content per bp:1.841
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.4 +/- 21.4bp
Average Position of motif in Background65.4 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGTGCTCTGCGGC
-ATGCCCTGAGGC
 A G T C T A C G A G C T C T A G G T A C A C G T A G T C A C G T A C T G A G T C C T A G A C T G A G T C
A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CGTGCTCTGCGGC
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A G T C T A C G A G C T C T A G G T A C A C G T A G T C A C G T A C T G A G T C C T A G A C T G A G T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CGTGCTCTGCGGC
-----GCTGTG--
 A G T C T A C G A G C T C T A G G T A C A C G T A G T C A C G T A C T G A G T C C T A G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CGTGCTCTGCGGC---
AATCGCACTGCATTCCG
 A C G T A G T C T A C G A G C T C T A G G T A C A C G T A G T C A C G T A C T G A G T C C T A G A C T G A G T C A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CGTGCTCTGCGGC
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T A G T C T A C G A G C T C T A G G T A C A C G T A G T C A C G T A C T G A G T C C T A G A C T G A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CGTGCTCTGCGGC-
------CAGCTGNT
 A G T C T A C G A G C T C T A G G T A C A C G T A G T C A C G T A C T G A G T C C T A G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CGTGCTCTGCGGC-
----CGCAGCTGCG
 A G T C T A C G A G C T C T A G G T A C A C G T A G T C A C G T A C T G A G T C C T A G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CGTGCTCTGCGGC
---DCTCAGCAGG
 A G T C T A C G A G C T C T A G G T A C A C G T A G T C A C G T A C T G A G T C C T A G A C T G A G T C
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CGTGCTCTGCGGC
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T A G T C T A C G A G C T C T A G G T A C A C G T A G T C A C G T A C T G A G T C C T A G A C T G A G T C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CGTGCTCTGCGGC--
-----TTTGCGGTTT
 A G T C T A C G A G C T C T A G G T A C A C G T A G T C A C G T A C T G A G T C C T A G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T