Information for 10-TGATAGTCCCAGC (Motif 12)

A C G T A C T G C G T A C G A T C G T A C T A G A C G T A G T C A G T C A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G G T A C A C G T A C T G A C T G A C T G C G T A A G T C A C G T C G T A C G A T A G T C G T C A
p-value:1e-9
log p-value:-2.150e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.6 +/- 16.9bp
Average Position of motif in Background63.9 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0139.1_Pitx3/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGATAGTCCCAGC
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T A C G T A C T G C G T A C G A T C G T A C T A G A C G T A G T C A G T C A G T C C G T A A C T G A G T C
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

PH0123.1_Obox3/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGATAGTCCCAGC--
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A C T G C G T A C G A T C G T A C T A G A C G T A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0137.1_Pitx1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGATAGTCCCAGC--
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C T G C G T A C G A T C G T A C T A G A C G T A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGATAGTCCCAGC
-CTTAATCCC---
 A C G T A C T G C G T A C G A T C G T A C T A G A C G T A G T C A G T C A G T C C G T A A C T G A G T C
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGATAGTCCCAGC
---GAGSCCGAGC
 A C G T A C T G C G T A C G A T C G T A C T A G A C G T A G T C A G T C A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGATAGTCCCAGC
--TTAATCCC---
 A C G T A C T G C G T A C G A T C G T A C T A G A C G T A G T C A G T C A G T C C G T A A C T G A G T C
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGATAGTCCCAGC
GGAAATTCCC---
 A C G T A C T G C G T A C G A T C G T A C T A G A C G T A G T C A G T C A G T C C G T A A C T G A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGATAGTCCCAGC--
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T A C T G C G T A C G A T C G T A C T A G A C G T A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGATAGTCCCAGC
---AAATCACTGC
 A C G T A C T G C G T A C G A T C G T A C T A G A C G T A G T C A G T C A G T C C G T A A C T G A G T C
A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGATAGTCCCAGC-
---AAATCACAGCA
 A C G T A C T G C G T A C G A T C G T A C T A G A C G T A G T C A G T C A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A