Information for 4-TGVTTACTCTTGGCAG (Motif 11)

A C G T A C T G T A C G A C G T A G C T G T C A G T A C A C G T A G T C A C G T C A G T A C T G A C T G A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T A C T G G T A C A G T C G T C A C G T A C T A G C G T A C A T G A C G T C T G A C G T A A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.524e+01
Information Content per bp:1.825
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 25.9bp
Average Position of motif in Background51.9 +/- 0.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:TGVTTACTCTTGGCAG-
-------NNTTGGCANN
 A C G T A C T G T A C G A C G T A G C T G T C A G T A C A C G T A G T C A C G T C A G T A C T G A C T G A G T C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGVTTACTCTTGGCAG
NNTGTTTATTTTGGCA-
 A C G T A C G T A C T G T A C G A C G T A G C T G T C A G T A C A C G T A G T C A C G T C A G T A C T G A C T G A G T C C G T A A T C G
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:TGVTTACTCTTGGCAG
--------CTTGGCAA
 A C G T A C T G T A C G A C G T A G C T G T C A G T A C A C G T A G T C A C G T C A G T A C T G A C T G A G T C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGVTTACTCTTGGCAG
TGTTTACTTT------
 A C G T A C T G T A C G A C G T A G C T G T C A G T A C A C G T A G T C A C G T C A G T A C T G A C T G A G T C C G T A A T C G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGVTTACTCTTGGCAG
TGTTTACTTT------
 A C G T A C T G T A C G A C G T A G C T G T C A G T A C A C G T A G T C A C G T C A G T A C T G A C T G A G T C C G T A A T C G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGVTTACTCTTGGCAG
TGTTTACTTAGG----
 A C G T A C T G T A C G A C G T A G C T G T C A G T A C A C G T A G T C A C G T C A G T A C T G A C T G A G T C C G T A A T C G
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:TGVTTACTCTTGGCAG-
--------NTTGGCANN
 A C G T A C T G T A C G A C G T A G C T G T C A G T A C A C G T A G T C A C G T C A G T A C T G A C T G A G T C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGVTTACTCTTGGCAG
CTTTGTTTACTTTTN----
 A C G T A C G T A C G T A C G T A C T G T A C G A C G T A G C T G T C A G T A C A C G T A G T C A C G T C A G T A C T G A C T G A G T C C G T A A T C G
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGVTTACTCTTGGCAG
TCCATGTTTACTTTG-----
 A C G T A C G T A C G T A C G T A C G T A C T G T A C G A C G T A G C T G T C A G T A C A C G T A G T C A C G T C A G T A C T G A C T G A G T C C G T A A T C G
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T A C G T A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGVTTACTCTTGGCAG
NTTGTTTACGTTNN----
 A C G T A C G T A C G T A C T G T A C G A C G T A G C T G T C A G T A C A C G T A G T C A C G T C A G T A C T G A C T G A G T C C G T A A T C G
G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G A C G T A C G T A C G T A C G T