Information for 6-SAAGMCAGCACGCACG (Motif 21)

A T G C C G T A T C G A A C T G G T A C G T A C T G C A T A C G A G T C C T G A A G T C A C T G A G T C C G T A T A G C C A T G
Reverse Opposite:
G A T C A T C G A C G T A C T G G T A C A C T G A G C T A C T G A T G C A C G T C A T G A C T G A G T C A G C T A C G T A T C G
p-value:1e-8
log p-value:-1.974e+01
Information Content per bp:1.753
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.8 +/- 19.0bp
Average Position of motif in Background56.1 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:SAAGMCAGCACGCACG
-----TBGCACGCAA-
 A T G C C G T A T C G A A C T G G T A C G T A C T G C A T A C G A G T C C T G A A G T C A C T G A G T C C G T A T A G C C A T G
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.66
Offset:8
Orientation:reverse strand
Alignment:SAAGMCAGCACGCACG
--------CACGCA--
 A T G C C G T A T C G A A C T G G T A C G T A C T G C A T A C G A G T C C T G A A G T C A C T G A G T C C G T A T A G C C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:SAAGMCAGCACGCACG---
---AGCGGCACACACGCAA
 A T G C C G T A T C G A A C T G G T A C G T A C T G C A T A C G A G T C C T G A A G T C A C T G A G T C C G T A T A G C C A T G A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:SAAGMCAGCACGCACG
-----AGCCACTCAAG
 A T G C C G T A T C G A A C T G G T A C G T A C T G C A T A C G A G T C C T G A A G T C A C T G A G T C C G T A T A G C C A T G
A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:SAAGMCAGCACGCACG
-------GCACGTNC-
 A T G C C G T A T C G A A C T G G T A C G T A C T G C A T A C G A G T C C T G A A G T C A C T G A G T C C G T A T A G C C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:SAAGMCAGCACGCACG
-------GCACGTAY-
 A T G C C G T A T C G A A C T G G T A C G T A C T G C A T A C G A G T C C T G A A G T C A C T G A G T C C G T A T A G C C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:SAAGMCAGCACGCACG
-----AAGCACTTAA-
 A T G C C G T A T C G A A C T G G T A C G T A C T G C A T A C G A G T C C T G A A G T C A C T G A G T C C G T A T A G C C A T G
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:SAAGMCAGCACGCACG--
--------CRCCCACGCA
 A T G C C G T A T C G A A C T G G T A C G T A C T G C A T A C G A G T C C T G A A G T C A C T G A G T C C G T A T A G C C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:SAAGMCAGCACGCACG--
------YCCGCCCACGCN
 A T G C C G T A T C G A A C T G G T A C G T A C T G C A T A C G A G T C C T G A A G T C A C T G A G T C C G T A T A G C C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:SAAGMCAGCACGCACG
------BGCACGTA--
 A T G C C G T A T C G A A C T G G T A C G T A C T G C A T A C G A G T C C T G A A G T C A C T G A G T C C G T A T A G C C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T