Information for 14-CTTCATGACHAAG (Motif 18)

A T G C A C G T A C G T A G T C G T C A C G A T A C T G C G T A A G T C G A T C G C T A C G T A A C T G
Reverse Opposite:
A G T C A C G T C A G T C A T G C T A G A C G T A G T C C G T A C A G T A C T G C G T A C G T A A T C G
p-value:1e-9
log p-value:-2.185e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.3 +/- 25.7bp
Average Position of motif in Background49.7 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTTCATGACHAAG--
TATCATAATTAAGGA
 A T G C A C G T A C G T A G T C G T C A C G A T A C T G C G T A A G T C G A T C G C T A C G T A A C T G A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

Stat6/MA0520.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTTCATGACHAAG
CATTTCCTGAGAAAT
 A C G T A C G T A T G C A C G T A C G T A G T C G T C A C G A T A C T G C G T A A G T C G A T C G C T A C G T A A C T G
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTTCATGACHAAG
ATTTGCATAACAAAG
 A C G T A C G T A T G C A C G T A C G T A G T C G T C A C G A T A C T G C G T A A G T C G A T C G C T A C G T A A C T G
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTTCATGACHAAG
CACTTCCTGT-----
 A C G T A C G T A T G C A C G T A C G T A G T C G T C A C G A T A C T G C G T A A G T C G A T C G C T A C G T A A C T G
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTTCATGACHAAG
---CATGAC----
 A T G C A C G T A C G T A G T C G T C A C G A T A C T G C G T A A G T C G A T C G C T A C G T A A C T G
A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTTCATGACHAAG
ACATTCATGACACG-
 A C G T A C G T A T G C A C G T A C G T A G T C G T C A C G A T A C T G C G T A A G T C G A T C G C T A C G T A A C T G
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTTCATGACHAAG-
----AAAACAAAGG
 A T G C A C G T A C G T A G T C G T C A C G A T A C T G C G T A A G T C G A T C G C T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTTCATGACHAAG
GCTTCC--------
 A C G T A T G C A C G T A C G T A G T C G T C A C G A T A C T G C G T A A G T C G A T C G C T A C G T A A C T G
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTTCATGACHAAG
NNAATTAATGACCNNN
 A C G T A C G T A C G T A T G C A C G T A C G T A G T C G T C A C G A T A C T G C G T A A G T C G A T C G C T A C G T A A C T G
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

HOXC10/MA0905.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTTCATGACHAAG
NTTTTACGAC----
 A C G T A T G C A C G T A C G T A G T C G T C A C G A T A C T G C G T A A G T C G A T C G C T A C G T A A C T G
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T A C G T