Information for 7-GGCCAGCHYCCTGCKG (Motif 8)

A C T G T A C G G T A C A G T C G T C A A T C G G T A C G A T C A G C T A G T C A G T C C G A T A T C G G T A C A C T G A T C G
Reverse Opposite:
A T G C T G A C A C T G A T G C C G T A C T A G C T A G C T G A C T A G A C T G A T G C A C G T A C T G A C T G A G T C A G T C
p-value:1e-11
log p-value:-2.700e+01
Information Content per bp:1.747
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif15.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.9 +/- 14.9bp
Average Position of motif in Background57.3 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGCCAGCHYCCTGCKG
GCCCCGCCCCCTCCC-
 A C T G T A C G G T A C A G T C G T C A A T C G G T A C G A T C A G C T A G T C A G T C C G A T A T C G G T A C A C T G A T C G
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGCCAGCHYCCTGCKG---
----GGCCYCCTGCTGDGH
 A C T G T A C G G T A C A G T C G T C A A T C G G T A C G A T C A G C T A G T C A G T C C G A T A T C G G T A C A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GGCCAGCHYCCTGCKG--
------CCCCCTGCTGTG
 A C T G T A C G G T A C A G T C G T C A A T C G G T A C G A T C A G C T A G T C A G T C C G A T A T C G G T A C A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCCAGCHYCCTGCKG
GGCCCCGCCCCC-----
 A C G T A C T G T A C G G T A C A G T C G T C A A T C G G T A C G A T C A G C T A G T C A G T C C G A T A T C G G T A C A C T G A T C G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCCAGCHYCCTGCKG
GGTCCCGCCCCCTTCTC
 A C G T A C T G T A C G G T A C A G T C G T C A A T C G G T A C G A T C A G C T A G T C A G T C C G A T A T C G G T A C A C T G A T C G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GGCCAGCHYCCTGCKG-----
------TNTCCTGCTGTGNNG
 A C T G T A C G G T A C A G T C G T C A A T C G G T A C G A T C A G C T A G T C A G T C C G A T A T C G G T A C A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCCAGCHYCCTGCKG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C T G T A C G G T A C A G T C G T C A A T C G G T A C G A T C A G C T A G T C A G T C C G A T A T C G G T A C A C T G A T C G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.54
Offset:9
Orientation:forward strand
Alignment:GGCCAGCHYCCTGCKG---
---------CCTGCTGAGH
 A C T G T A C G G T A C A G T C G T C A A T C G G T A C G A T C A G C T A G T C A G T C C G A T A T C G G T A C A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGCCAGCHYCCTGCKG
GCCCCGCCCCC-----
 A C T G T A C G G T A C A G T C G T C A A T C G G T A C G A T C A G C T A G T C A G T C C G A T A T C G G T A C A C T G A T C G
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGCCAGCHYCCTGCKG
--ACCACATCCTGT--
 A C T G T A C G G T A C A G T C G T C A A T C G G T A C G A T C A G C T A G T C A G T C C G A T A T C G G T A C A C T G A T C G
A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T