Information for 6-TACAWTTTAGTGTCAT (Motif 7)

A C G T C G T A T A G C C G T A C G T A C G A T C G A T A C G T C T G A A C T G A C G T C A T G A C G T G T A C G T C A C A G T
Reverse Opposite:
G C T A A C G T C A T G G T C A G A T C G T C A G T A C A G C T C G T A G C T A C G T A G C A T C G A T A C T G G C A T C G T A
p-value:1e-12
log p-value:-2.965e+01
Information Content per bp:1.698
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.2 +/- 17.8bp
Average Position of motif in Background46.8 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TACAWTTTAGTGTCAT
NTNAATTTTATTGNATT
 A C G T A C G T C G T A T A G C C G T A C G T A C G A T C G A T A C G T C T G A A C T G A C G T C A T G A C G T G T A C G T C A C A G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TACAWTTTAGTGTCAT
TNAATTTTATTACCTN
 A C G T C G T A T A G C C G T A C G T A C G A T C G A T A C G T C T G A A C T G A C G T C A T G A C G T G T A C G T C A C A G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TACAWTTTAGTGTCAT
---TTTTTATTGG---
 A C G T C G T A T A G C C G T A C G T A C G A T C G A T A C G T C T G A A C T G A C G T C A T G A C G T G T A C G T C A C A G T
A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TACAWTTTAGTGTCAT
---NTTTTATTGG---
 A C G T C G T A T A G C C G T A C G T A C G A T C G A T A C G T C T G A A C T G A C G T C A T G A C G T G T A C G T C A C A G T
A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TACAWTTTAGTGTCAT
NNANTTTTATTGGNNN
 A C G T C G T A T A G C C G T A C G T A C G A T C G A T A C G T C T G A A C T G A C G T C A T G A C G T G T A C G T C A C A G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0013.1_Cdx2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TACAWTTTAGTGTCAT-
-NAATTTTATTACCNNN
 A C G T C G T A T A G C C G T A C G T A C G A T C G A T A C G T C T G A A C T G A C G T C A T G A C G T G T A C G T C A C A G T A C G T
A C G T C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TACAWTTTAGTGTCAT
NNAATTTTATTGGNTN
 A C G T C G T A T A G C C G T A C G T A C G A T C G A T A C G T C T G A A C T G A C G T C A T G A C G T G T A C G T C A C A G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TACAWTTTAGTGTCAT
----TTTTATTGC---
 A C G T C G T A T A G C C G T A C G T A C G A T C G A T A C G T C T G A A C T G A C G T C A T G A C G T G T A C G T C A C A G T
A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TACAWTTTAGTGTCAT---
---AANTTATTGTTCTNNA
 A C G T C G T A T A G C C G T A C G T A C G A T C G A T A C G T C T G A A C T G A C G T C A T G A C G T G T A C G T C A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TACAWTTTAGTGTCAT
---NTTTTATTGG---
 A C G T C G T A T A G C C G T A C G T A C G A T C G A T A C G T C T G A A C T G A C G T C A T G A C G T G T A C G T C A C A G T
A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T