Information for 5-ATATWYMKSTYTGCTT (Motif 5)

C G T A A C G T C G T A A C G T C G T A A G C T T G C A A C G T A T G C A C G T A G T C A C G T A C T G A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C C G T A C T A G C G T A A T C G G T C A A C G T C T G A G C A T C G T A C G A T C G T A C G A T
p-value:1e-11
log p-value:-2.651e+01
Information Content per bp:1.845
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.8 +/- 27.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----ATATWYMKSTYTGCTT
ATGGGATATATCCGCCT----
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A G C T T G C A A C G T A T G C A C G T A G T C A C G T A C T G A G T C A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T A C G T A C G T A C G T A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATATWYMKSTYTGCTT---
NNTGTTCTTTTTTGTTTACT
 A C G T C G T A A C G T C G T A A C G T C G T A A G C T T G C A A C G T A T G C A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.51
Offset:7
Orientation:forward strand
Alignment:ATATWYMKSTYTGCTT-
-------TRTTTACTTW
 C G T A A C G T C G T A A C G T C G T A A G C T T G C A A C G T A T G C A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:ATATWYMKSTYTGCTT-
-------TGTTTACTTT
 C G T A A C G T C G T A A C G T C G T A A G C T T G C A A C G T A T G C A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--ATATWYMKSTYTGCTT
GHATATKCAT--------
 A C G T A C G T C G T A A C G T C G T A A C G T C G T A A G C T T G C A A C G T A T G C A C G T A G T C A C G T A C T G A G T C A C G T A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:forward strand
Alignment:ATATWYMKSTYTGCTT--
---TCCATGTTTACTTTG
 C G T A A C G T C G T A A C G T C G T A A G C T T G C A A C G T A T G C A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:ATATWYMKSTYTGCTT-
-------TGTTTACTTT
 C G T A A C G T C G T A A C G T C G T A A G C T T G C A A C G T A T G C A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--ATATWYMKSTYTGCTT
GAATATTCAT--------
 A C G T A C G T C G T A A C G T C G T A A C G T C G T A A G C T T G C A A C G T A T G C A C G T A G T C A C G T A C T G A G T C A C G T A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:ATATWYMKSTYTGCTT-------
--------CTTTGTTTACTTTTN
 C G T A A C G T C G T A A C G T C G T A A G C T T G C A A C G T A T G C A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:ATATWYMKSTYTGCTT--
--NNNNTTGTGTGCTTNN
 C G T A A C G T C G T A A C G T C G T A A G C T T G C A A C G T A T G C A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G