Information for 22-TSCCCGYSSCKGGCMS (Motif 47)

A C G T A T C G A G T C A G T C A G T C C T A G A G T C A T G C T A C G A G T C C A T G A C T G C T A G A G T C G T C A A T G C
Reverse Opposite:
A T C G A C G T A C T G A G T C A G T C G T A C A C T G A T C G A T C G C T A G A G T C A C T G A C T G A C T G A T G C C G T A
p-value:1e-4
log p-value:-9.380e+00
Information Content per bp:1.817
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets13.0 +/- 6.0bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TSCCCGYSSCKGGCMS
ATGCCCACC--------
 A C G T A C G T A T C G A G T C A G T C A G T C C T A G A G T C A T G C T A C G A G T C C A T G A C T G C T A G A G T C G T C A A T G C
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TSCCCGYSSCKGGCMS
GCCCCGCCCCCTCCC-
 A C G T A T C G A G T C A G T C A G T C C T A G A G T C A T G C T A C G A G T C C A T G A C T G C T A G A G T C G T C A A T G C
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TSCCCGYSSCKGGCMS
NNTTCCCGCCC-------
 A C G T A C G T A C G T A T C G A G T C A G T C A G T C C T A G A G T C A T G C T A C G A G T C C A T G A C T G C T A G A G T C G T C A A T G C
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TSCCCGYSSCKGGCMS
TTCCCGCCWG------
 A C G T A T C G A G T C A G T C A G T C C T A G A G T C A T G C T A C G A G T C C A T G A C T G C T A G A G T C G T C A A T G C
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TSCCCGYSSCKGGCMS
TCCCCA----------
 A C G T A T C G A G T C A G T C A G T C C T A G A G T C A T G C T A C G A G T C C A T G A C T G C T A G A G T C G T C A A T G C
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TSCCCGYSSCKGGCMS
VDTTTCCCGCCA-------
 A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G T C C T A G A G T C A T G C T A C G A G T C C A T G A C T G C T A G A G T C G T C A A T G C
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TSCCCGYSSCKGGCMS
GCCCCGCCCCC-----
 A C G T A T C G A G T C A G T C A G T C C T A G A G T C A T G C T A C G A G T C C A T G A C T G C T A G A G T C G T C A A T G C
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TSCCCGYSSCKGGCMS
CTGCCCGCA--------
 A C G T A C G T A T C G A G T C A G T C A G T C C T A G A G T C A T G C T A C G A G T C C A T G A C T G C T A G A G T C G T C A A T G C
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TSCCCGYSSCKGGCMS
----CGCCTCAGGCA-
 A C G T A T C G A G T C A G T C A G T C C T A G A G T C A T G C T A C G A G T C C A T G A C T G C T A G A G T C G T C A A T G C
A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TSCCCGYSSCKGGCMS
ATCCCCGCCCCTAAAA-
 A C G T A C G T A T C G A G T C A G T C A G T C C T A G A G T C A T G C T A C G A G T C C A T G A C T G C T A G A G T C G T C A A T G C
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T