Information for 21-GCACCTCTGTTCCTCG (Motif 46)

A T C G A G T C C G T A A G T C A G T C A C G T A T G C A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C C T A G
Reverse Opposite:
A G T C A C T G C G T A A C T G C T A G C G T A C G T A A G T C C G T A A T C G C G T A A C T G A C T G A C G T C T A G A T G C
p-value:1e-4
log p-value:-9.380e+00
Information Content per bp:1.938
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 29.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCACCTCTGTTCCTCG
---YCTTTGTTCC---
 A T C G A G T C C G T A A G T C A G T C A C G T A T G C A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C C T A G
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCACCTCTGTTCCTCG
----TKCTGTTCCA--
 A T C G A G T C C G T A A G T C A G T C A C G T A T G C A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C C T A G
A C G T A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GCACCTCTGTTCCTCG
------CTGTTCCTGG
 A T C G A G T C C G T A A G T C A G T C A C G T A T G C A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCACCTCTGTTCCTCG
---CCTTTGTTTT---
 A T C G A G T C C G T A A G T C A G T C A C G T A T G C A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C C T A G
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCACCTCTGTTCCTCG
---CCTTTGTT-----
 A T C G A G T C C G T A A G T C A G T C A C G T A T G C A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C C T A G
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCACCTCTGTTCCTCG
NNNTCCTTTGTTCTNNN
 A C G T A T C G A G T C C G T A A G T C A G T C A C G T A T G C A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C C T A G
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCACCTCTGTTCCTCG
TNNTCCTTTGTTCTNNT
 A C G T A T C G A G T C C G T A A G T C A G T C A C G T A T G C A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C C T A G
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0047.1_Myf6_1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCACCTCTGTTCCTCG
CNGACACCTGTTCNNN-
 A C G T A T C G A G T C C G T A A G T C A G T C A C G T A T G C A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C C T A G
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCACCTCTGTTCCTCG
---CCWTTGTYYB---
 A T C G A G T C C G T A A G T C A G T C A C G T A T G C A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C C T A G
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GCACCTCTGTTCCTCG
NNTNCGCACCTGTNGAN----
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C A G T C A C G T A T G C A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C C T A G
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T A C G T A C G T A C G T